| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0413 |
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| Symbol | |
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| ID | 7970154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 446649 |
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| End bp | 447965 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791016 |
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| Product | glucose-1-phosphate adenylyltransferase |
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| Protein accession | YP_002942342 |
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| Protein GI | 239813432 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAACC ACAGCATCAG CAGCAACAGC ACGCCGCAGG CCCCCCTGCA GGCGCATCAA
CTGGTCCGCC GCACCATCGC GCTGGTGCTG GCCGGCGGCC GGGGCTCGCG CCTCAAGCAG
CTGACCGACC GGCGCGCCAA GCCGGCGGTG TACTTCGGCG GCAAGTTCCG CATCATCGAC
TTCGCGCTGT CGAACTGCCT GAACTCGGGC ATCCGGCGCA TGGCGGTGGT CACGCAGTAC
AAGTCGCATT CGCTGATGCG CCACCTGCAG CGCGGCTGGA GCTTCCTGCG CGCCGAGCTC
AACGAGATGG TCGACGTGCT GCCCGCGCAG CAGCGCACGG GCGACGAGCA CTGGTACCGC
GGCACCGCCG ACGCGGTGTA CCAGAACCTG GACATCATCC AGACCCGCTC CACCAAGCAC
GACTACGTGG TGGTGCTGGC CGGCGACCAT ATCTACAAAA TGGACTACTC CATCATGGTC
AAGGACCATG CCGAGCGCGG CCTGGGCTGC ACGGTCGGCT GCATCGAGGT GCCGCGCATG
GAGGCCACCG CCTTCGGCGT GATGGCCATC GACGACGGCC GCCAGATCAC GGCCTTCCTC
GAAAAGCCGG CCGATCCGCC CGCCATGCCG GGCCATCCCG ACGTGGCGCT CGCGAGCATG
GGCATCTACG TGTTCGATTC CGAGTACCTC TACCAGCTGC TCGAGGAAGA CGCCGCCAAC
CCCGATTCGA GCCACGATTT CGGCAAGGAC ATCATCCCGC GCGCCGTGGC GCAGGGCCGC
GCGCTGGCGC ACCCCTTCGG CATGTCCTGC GTCACGCGCG CCTCGCGCGG GCCCGACGCC
AAGGCCTACT GGCGCGACGT GGGCACGATT GATGCATTCT GGGCAGCCAA CCTCGACCTG
GCCTCCATCA CGCCCGAACT CGACATCTAT GACACAGACT GGCCCATCTG GACCTACCAG
CGGCAGCTGC CGCCGGCCAA GTTCGTGCTC GACCGCGAGG GCAAGCACGG CATGACCGTC
AACACCATCG TCTCGGGCGG CTGCATCGTC TCGGGCTCCA AGGTCAGCAG CTCGGTGCTG
TTCTCGGGCG TGCGCATCCA CTCGTTCTGC GACATCAACG AGGCCGTGCT GCTGCCCGAC
GTCGAGGTGG GCCGCGGCGC CCGGCTCAAC CGCGTGGTGG TCGACCGCGG CTGTGTCATT
CCGGACGAGA TGGTGATCGG CGAAGACGCC GACGCCGATG CCGCGCGCTT CGAGCGCACC
GACAACGGCG TGGTGCTGGT CACCCGCGAA ATGCTCAAGC GCCTGCTGGC TGCCTGA
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| Protein sequence | MDNHSISSNS TPQAPLQAHQ LVRRTIALVL AGGRGSRLKQ LTDRRAKPAV YFGGKFRIID
FALSNCLNSG IRRMAVVTQY KSHSLMRHLQ RGWSFLRAEL NEMVDVLPAQ QRTGDEHWYR
GTADAVYQNL DIIQTRSTKH DYVVVLAGDH IYKMDYSIMV KDHAERGLGC TVGCIEVPRM
EATAFGVMAI DDGRQITAFL EKPADPPAMP GHPDVALASM GIYVFDSEYL YQLLEEDAAN
PDSSHDFGKD IIPRAVAQGR ALAHPFGMSC VTRASRGPDA KAYWRDVGTI DAFWAANLDL
ASITPELDIY DTDWPIWTYQ RQLPPAKFVL DREGKHGMTV NTIVSGGCIV SGSKVSSSVL
FSGVRIHSFC DINEAVLLPD VEVGRGARLN RVVVDRGCVI PDEMVIGEDA DADAARFERT
DNGVVLVTRE MLKRLLAA
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