| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0376 |
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| Symbol | |
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| ID | 7973520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 407473 |
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| End bp | 408231 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790979 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002942305 |
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| Protein GI | 239813395 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAGTA GTCCCAACGA CATCTCGACC GTGCTCGACC GCAATTCCGA ATCGCCGCTG
TGGGCGCAGT TCCGCGACGC CATCCGGCTG CAGATACTGC AGGGCGCGCT GCCCATCGGC
GCCAAGCTGC CTTCGGAGGC GGAGCTCGGC GAGCAGTTCG GCATCTCGCG CATCGTGGTG
CGCGAGGCCT TGGCCGACCT GGTGCGCAAC AACCTCATCT ACAAGATCAA GGGCCGCGGC
GCCTTTGTAT CGGCGCGCGA ACGCGACGAG GATTTTGTTT CCACCGTGCT CGGCTTCTCC
GACGAGATGG AGCGCAAGGG CCGCTCGGTG CGCACGCAGA TCCTCGCGCA GGAACTGCGC
GCGCCCACCG AGCATGAAGC CGCAGCGCTG GGCCTGGCCG ACGACGCGCA GGTGGTGGCC
CTCAAGCGCC TGCGCAGCGT GGATGGCGAG CTGCGCCTCT TGGTCGAGAC GGCGGTGCCG
GCGGACCTGG CGCCCGGCCT GCACCGCGCA CGCCTGGAAG ACCGCTCGCT CTACGACGTG
CTGCGCCGCC AGTACGGGCT GCGCCTGGTG CGTGCCGAAC GCTGGATCGA CGCGGTGCTG
CCCGATGCCG AAACCTGCAG GCTGCTCGAC CTGCCGCAGC CCGAGCCGCT GCTGCGCATC
GAGTCGATTG CCTACGGTGC CAACGGCCGG CCGCTGGAGC ACTACCGCGC GCTGCACCGC
TGCAAGACCA GCCGCCTGCA CGTGCAGACG ACCACCTGA
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| Protein sequence | MNSSPNDIST VLDRNSESPL WAQFRDAIRL QILQGALPIG AKLPSEAELG EQFGISRIVV
REALADLVRN NLIYKIKGRG AFVSARERDE DFVSTVLGFS DEMERKGRSV RTQILAQELR
APTEHEAAAL GLADDAQVVA LKRLRSVDGE LRLLVETAVP ADLAPGLHRA RLEDRSLYDV
LRRQYGLRLV RAERWIDAVL PDAETCRLLD LPQPEPLLRI ESIAYGANGR PLEHYRALHR
CKTSRLHVQT TT
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