| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0287 |
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| Symbol | |
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| ID | 7972636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 308268 |
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| End bp | 309542 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790890 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_002942216 |
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| Protein GI | 239813306 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.496087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CCGCACTGAA CGCCACCCAC GACCCGAAGC TGCGCAGCTG GGTCGCCTCC
GCCAACCAAG CCGGCTGCGA CTTCCCGATC CAGAACCTGC CCTTCGGGCG CTTCCGCACG
GCCGGCAGCA GCGAGGCTTT CCGCATCGGC GTGGCCATCG GCGACCAGGT GCTGGACCTG
AAGGCGGCCG GCCTCGTCGA CAGCGACGAC ATGAATGCGC TGATGAACGC GAGCGTGAAG
GAGCGCCAGG CGCTGCGCGC GGCCATCTCC GCGGGCCTGG CCGAAGGCAG CAGCCAGCAG
GCGGCCTGGG CCAAGGCACT GCTGCCGCAA GCCAAGGCCG AAATGACCGT GCCCTGCCGC
ATCGGCGACT ACACCGACTT CTACACCGGC ATCCACCACG CCACCACCAT CGGCAAGCTG
TTCCGCCCCG ACCAGCCGCT GATGCCCAAC TACAAGTGGG TGCCGATCGG CTACCACGGC
CGCGCCTCGT CGATCGGCGT GAGCGGGCAG GTCTTCAAGC GGCCGCAGGG CCAGACCAAG
GCGCCCGACG CGGCCGAACC CGGCTTCGGC CCCTCGAAGC GGCTCGACTA CGAACTGGAG
CTGGGCTTCT TCGTCGGCCG CGGCAATGCG CTCGGCGAGC CGATTGCCAT CGCCGAGGCC
GAGGACCACC TGTTCGGCGT GGCGCTGCTC AACGACTGGT CGGCGCGCGA CATCCAGGCC
TGGGAGTACC AGCCGCTCGG CCCCTTCCTC TCGAAGAATT TCGCAAGCAC GCTGTCGCCG
TGGATCGTGA CGATGGAGGC GCTGGCGCCG TTCCGCGCCC GCTTCGAGCG GCCCGCGGGA
GATCCGCAGC CGCTCGCGTA CCTCGATGCG CCCTCGAACC GTGAAAGCGG CGCGCTCGAC
ATCACGCTCG AAGTGCTGCT GCAGACCGCG AAGATGCGCG CCGAAGGCCT GGCGCCCGCG
CGCCTCACGC GCGGCAACAC CACCGAGGCC GCCTACTGGA CCGCCGCGCA GCTGGTCGCG
CACCACACGG TGAACGGCTG CAACCTGCAG CCGGGCGACC TGCTGGGCTC GGGCACGCTG
TCGGGCCCCC AGCCCGACGA GGCCGGCTCG CTGATCGAGC TCACGCAGGG CGGCAAGCAG
CCGATCACGC TGCCCAACGG CGAGAAGCGC ACCTTCCTCG AGGACGGAGA CACGCTGGTG
ATCCGCGGCT ACTGCGAGCG CGCAGGCGCG GTGCGCATCG GCCTGGGCGA GGTCAGCGGT
ACGGTGGTGG CCTGA
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| Protein sequence | MSTTALNATH DPKLRSWVAS ANQAGCDFPI QNLPFGRFRT AGSSEAFRIG VAIGDQVLDL
KAAGLVDSDD MNALMNASVK ERQALRAAIS AGLAEGSSQQ AAWAKALLPQ AKAEMTVPCR
IGDYTDFYTG IHHATTIGKL FRPDQPLMPN YKWVPIGYHG RASSIGVSGQ VFKRPQGQTK
APDAAEPGFG PSKRLDYELE LGFFVGRGNA LGEPIAIAEA EDHLFGVALL NDWSARDIQA
WEYQPLGPFL SKNFASTLSP WIVTMEALAP FRARFERPAG DPQPLAYLDA PSNRESGALD
ITLEVLLQTA KMRAEGLAPA RLTRGNTTEA AYWTAAQLVA HHTVNGCNLQ PGDLLGSGTL
SGPQPDEAGS LIELTQGGKQ PITLPNGEKR TFLEDGDTLV IRGYCERAGA VRIGLGEVSG
TVVA
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