| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0280 |
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| Symbol | |
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| ID | 7972629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 300083 |
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| End bp | 301513 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790883 |
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| Product | glutamyl-tRNA(Gln) amidotransferase, B subunit |
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| Protein accession | YP_002942209 |
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| Protein GI | 239813299 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0438803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGGCT ATGAAGTCAT CATCGGCTTC GAGACGCACG CGCAACTCTC GACCGCGAGC
AAGATCTTCA GCCGCGCCTC CACCGCTTTC GGCGCCGAGC CCAACACGCA GGCCTGCGCG
GTCGACCTCG CGCTGCCCGG CACGCTGCCC GTGATGAACA AGGGCGCGGT CGAACGCGCC
ATCAAGCTGG GCCTGGCGCT CGGCTCGCAC ATCGCGCCGC GCAGCGTGTT CGCGCGCAAG
AACTATTTCT ACCCCGACCT GCCCAAGGGC TACCAGATCA GCCAGTACGA GATCCCGGTG
GTGCAGGGCG GCGCGGTCTC TTTCTTCCTT GGCGAAGAAA AGAAGACCGT GCGCCTGGTG
CGCGCCCACC TCGAGGAAGA CGCGGGCAAG TCGCTGCACG AGAACTTCAT CGGCCAGAGC
GGCATCGACC TGAACCGCGC CGGCACGCCG CTGCTGGAGA TCGTGACCGA GCCCGACATG
CGCTCCACCG CCGAGGCCGT GGCCTATGCG CGCGAGCTGC ACAAGATCGT CACCTGGATC
GGCATCTGCG ACGGCAACAT GCAGGAAGGG AGCTTCCGCT GCGACGCCAA CGTGTCGGTG
CGCAAGCCCG GCGAGAAGCT CGGCACGCGG CGCGAGATCA AGAACCTGAA CAGCTTCAAG
TTCATGCAGC AGGCGATCGA CTACGAGATC AACTCGCAGA TCAACGAGCT GGAAGACGGC
CGCAAGATCG AGCAGGCCAC CGTGCTGTTC GACCCCGACA CCGGCGAGAC GCGCACCATG
CGCACCAAGG AAGACGCGGC CGACTACCGC TACTTTCCCG ATCCCGACCT GCCGCCGCTG
GCCATCGAGG CCGAGTGGAT CGAGCGCGTG CGCGCCACCA TGCCCGAGCT GCCGCGCGCC
ATGGCCGAGC GCTATGTGCG CGACCACGGC ATGTCCGAAT ACGACGCGGC GCAGCTCACG
CAGAGCCCGG CGCTCGCGCG CTACTTCGAC GACGCGGTGA AGGCCGGCGC GACGCCCAAG
CTCGCGAGCA ACTGGATCAC CGGCGAAATG GCGCGCCGCC TGAACGCGCA GGAGATCGGC
ATCGAGGCCG CGCCCGTCAC GGCGCAGCAG CTGGCGCAGC TGGTCGGGCG CATTGCCGAC
GGCACGCTGC CCAACAACGC CGCGCGCCAG GTGTTCGACG CGCTCTGGAC CGGCGAAGGC
AGCGATGTCG ACGCCATCAT CGAGGCCAGG GACCTGAAGC CCATGAGCGA CACCGGCGCG
CTCGACAGGA TCCTGGACGA GGTGATCGCC AAGAACGCGA AGAACGTCGA GGAATACCGC
GGCGGCAAGG AAAAGGCGCT CAACGGCCTC GTGGGCCAGG TGATGAAGGC CAGCGGCGGC
AAGGCGAACC CGGCGCAGGT GACCGAGCTG CTGAAAGCAA AATTGGGCTG A
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| Protein sequence | MRGYEVIIGF ETHAQLSTAS KIFSRASTAF GAEPNTQACA VDLALPGTLP VMNKGAVERA
IKLGLALGSH IAPRSVFARK NYFYPDLPKG YQISQYEIPV VQGGAVSFFL GEEKKTVRLV
RAHLEEDAGK SLHENFIGQS GIDLNRAGTP LLEIVTEPDM RSTAEAVAYA RELHKIVTWI
GICDGNMQEG SFRCDANVSV RKPGEKLGTR REIKNLNSFK FMQQAIDYEI NSQINELEDG
RKIEQATVLF DPDTGETRTM RTKEDAADYR YFPDPDLPPL AIEAEWIERV RATMPELPRA
MAERYVRDHG MSEYDAAQLT QSPALARYFD DAVKAGATPK LASNWITGEM ARRLNAQEIG
IEAAPVTAQQ LAQLVGRIAD GTLPNNAARQ VFDALWTGEG SDVDAIIEAR DLKPMSDTGA
LDRILDEVIA KNAKNVEEYR GGKEKALNGL VGQVMKASGG KANPAQVTEL LKAKLG
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