Gene Vapar_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0279 
Symbol 
ID7972628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp299393 
End bp300079 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content71% 
IMG OID644790882 
Producthypothetical protein 
Protein accessionYP_002942208 
Protein GI239813298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00278726 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCATTC ACAAGCCCGG CCTGGCGGCC CGACCGTTCG CAGCCCCCTG GGTGCTGCTG 
TTGCCGATGG CACTCTGGGC TGGCGCGGTC CCGGCGCAGC CCGCACCGGC GCCGGCCGCG 
GGCATTTATT CATGCACCGA TGCGCGCGGC CGCACGCTCA CGGCCGACCG CCCGATTGCC 
GAATGCGTCG ACCGCGAACA GCGCGAACTG AGCCCGAGCG GCACCACGCG CCGCCGCATC 
GAACCCACGT ACACCGCCCG TGAACTGGCC GAGCGCGAAG ACCGCGCCCG CGAGGCCGCC 
CTGCAGGCCG CGCGCCTGAC CGACGAGCGC CGCCGCGAGC GCGCACTGCT GGTGCGCTAT 
CCCAACGCCG AAGTGCATGA CCGCGAGCGC GCCGAGGCGC TGGTGCAGAT CGACGCGGTG 
ATCCAGGCCG CGAAGAAGCG CCTGGCCGAA CTCGCCGAAG ACCGCCACAA GATCGACGAG 
GAGCTCGAGT TCTACAAGCA CGACGTGAGC AAGGCGCCCG GCGCCGTGCG CCGCAAGCTC 
GAGGACAACG CGCAGAGCGT GGCGGTGCAG AACCGCTTCA TCGGCGAGCA GGAAGACGAG 
AAGAAGCGCG TCAATGCGCG CTTCGACGAG GAGCGCACGC GCTTGAAGCA GCTCTGGTCC 
CCCCAGAACG GCGGTATCAA GCGCTGA
 
Protein sequence
MPIHKPGLAA RPFAAPWVLL LPMALWAGAV PAQPAPAPAA GIYSCTDARG RTLTADRPIA 
ECVDREQREL SPSGTTRRRI EPTYTARELA EREDRAREAA LQAARLTDER RRERALLVRY 
PNAEVHDRER AEALVQIDAV IQAAKKRLAE LAEDRHKIDE ELEFYKHDVS KAPGAVRRKL 
EDNAQSVAVQ NRFIGEQEDE KKRVNARFDE ERTRLKQLWS PQNGGIKR