Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0240 |
Symbol | |
ID | 7971449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 256794 |
End bp | 257597 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644790843 |
Product | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
Protein accession | YP_002942169 |
Protein GI | 239813259 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | [TIGR02312] 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCACCG CCGACACCAT CGCCAGCCTC GCGGCCGAAC TGCACGAAAG CGAAAAGTCG CGCGTTCAGG TCGAGCACTT CTCCAAGCGC TTTCCCGAAA TGACCATCGA GGACGGCTAC GCCATCTCGC GTGCATGGGT GAAGCAGAAG ATCGCGGAAG GCCGCGTGCC GCGGGGCCAC AAGATCGGCC TGACCTCGCG CGCCATGCAG CAGTCCAGCC AGATCGACGA GCCCGACTAC GGCACCCTGC TCGACGACAT GTTCTTCGAG CAGGGCGGCG ACATTCCGTT CAAGCGCTTC ATCGCGCCGC GCATCGAGGT GGAGCTGGCC TTCGTGCTCG GCAGGAAGCT GCAGGGCCCG AACGTCACGA TCTTCGACGT GCTGGCCGCC ACCGACTATG TGGTGCCGGC CATCGAGATC ATCGATGCGC GCATCGAGCA GTTCGACCGC CACACCAAGG CGCCGCGCAA GGTGTTCGAC ACCATTGCCG ACAACGCGGC CAACGCCGGC ATCGTGATGG GCGGACGGCC GGTCAAGCCC GACGCGGTCG ACCTGCGCTG GGTGAGCGCG CTGCTCTACA AGAACGGCGT GATCGAAGAA TCGGGCGTGG CCGCGGCCGT GCTCAACCAC CCGGCCACGG GCGTGGCCTG GCTCGCGAAC AAGCTCGCGC CGTGGGACGA ATGCCTCGAA GCCGGCGAAG TGGTGCTCGG CGGCTCGTTC ACGCGGCCGA CCACCGCCCT GCCCGGCGAC ACCTTCCATG CCGACTACGG CCCTCTGGGC AGCATTGCCT TTCGTCTCAT CTAA
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Protein sequence | MLTADTIASL AAELHESEKS RVQVEHFSKR FPEMTIEDGY AISRAWVKQK IAEGRVPRGH KIGLTSRAMQ QSSQIDEPDY GTLLDDMFFE QGGDIPFKRF IAPRIEVELA FVLGRKLQGP NVTIFDVLAA TDYVVPAIEI IDARIEQFDR HTKAPRKVFD TIADNAANAG IVMGGRPVKP DAVDLRWVSA LLYKNGVIEE SGVAAAVLNH PATGVAWLAN KLAPWDECLE AGEVVLGGSF TRPTTALPGD TFHADYGPLG SIAFRLI
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