Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0177 |
Symbol | |
ID | 7971386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 181035 |
End bp | 181808 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644790780 |
Product | oxidoreductase FAD/NAD(P)-binding domain protein |
Protein accession | YP_002942106 |
Protein GI | 239813196 |
COG category | [C] Energy production and conversion |
COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.374024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCTT TCAGCGAAGA ACGCGTCCTG AGCGTCCACC ACTGGACCGA CCGCCTTTTC ACCTTCACCA CCACGCGCGA CCCGGCGCTG CGCTTCTCGA ACGGCCATTT CACGATGATC GGCCTGAAGG TCAACAACAA GCCCCTGCTG CGCGCCTACA GCATCGTGAG CCCCAACTAC GAGGAGCATC TCGAGTTCCT GAGCATCAAG GTGGAAGAAG GCCCGCTCAC CTCCAAGCTG CAGCACATCC AGGTGGGCGA CACCATCATC GTGGGCCGCA AGCCCACCGG CACGCTGCTG ATCGACTACA CGCTGCCCGG CAAGCGCCTG TACCTGTTCG GCACCGGAAC GGGGCTCGCA CCGTTCATGA GCATCATCCG CGACCCGGAC ACGTACGAGA AGTTCGAGCA GGTCATCCTG GTGCACGGCG TGCGCCAGGT CGACGAGCTG GCCTACCACG ACCTCGTGAC CGACCACCTG CCCAAGCACG AGTTCCTGGG CGAGATGGTC GAGAAGCAGC TGCTCTACTA CCCGACGGTC ACGCGCGAGG AATTCCGCAA CCAGGGCCGC ATCACCGACC TGATCGAGAC CAACAAGCTC ACCGACGACC TCGGCCTGCC GCCGATCAAC CCGATGGAAG ACCGCGTGAT GCTGTGCGGC AGCCCGGGCC TCCTGGTGGA CCTGAAGCAC ATCCTGGAGA AGCGCGGCTT CAAGGAAGGC AACACCTCGA CGCCGGGCGA CTTTGTCGTC GAACGCGCCT TCGCCGAAAA ATAA
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Protein sequence | MSAFSEERVL SVHHWTDRLF TFTTTRDPAL RFSNGHFTMI GLKVNNKPLL RAYSIVSPNY EEHLEFLSIK VEEGPLTSKL QHIQVGDTII VGRKPTGTLL IDYTLPGKRL YLFGTGTGLA PFMSIIRDPD TYEKFEQVIL VHGVRQVDEL AYHDLVTDHL PKHEFLGEMV EKQLLYYPTV TREEFRNQGR ITDLIETNKL TDDLGLPPIN PMEDRVMLCG SPGLLVDLKH ILEKRGFKEG NTSTPGDFVV ERAFAEK
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