| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0173 |
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| Symbol | |
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| ID | 7971382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 177628 |
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| End bp | 178605 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790776 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_002942102 |
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| Protein GI | 239813192 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG ACAACCCCTC TGCCGCCGCC CGCGCCCCGA TCCGCATCGC GGCGGTGATC
CCCTGCTACA ACGAGGCGCT GTCGATCGCG CAGGTGGTCG CGCAGTTCCG CGCGGCGCTG
CCCGAGGCCG AGATTCACGT CTTCGACAAC AACTCGACCG ACGACACGGC CGCCATCGCG
CGCGCGAGCG GCGCCACGGT CACGCACGTG GCCGCGCCCG GCAAGGGCAA CGTCGTGCGC
CGCATGTTCG CCGACGTCGA AGCCGACGTG TACGTGACGG TCGACGGCGA CGCCACCTAC
GACGTGGCCA GCGCGCCGCG GCTGGTGGAC GCGCTGGTGG AGCGCAACCT CGACATGGTG
GTGGGCTGCC GAGTCGACGA TGGGCAGAAC GCGCTCACCT ACCGCGCCGG CCACCGCTTC
GGCAACCGGC TGCTCACGGG CGCCGTGGCG CAGCTTTTCG GCGGCGGGCT GACCGACATG
CTCTCGGGCT ACCGCGTGTT CTCGCGCCGC TACGCCAAGT CGTTCCCGGC GCTCTCGCAG
GGCTTCGAGA TCGAGACCGA GCTCACGGTG CACGCGCTCG AGCTGCGCAT GCCCCATGCC
GAGTTCGACA CCGCCTACAG CACGCGGCCC GAAGGCTCGC ACAGCAAGCT CTCGACCTAC
CGCGACGGCT GGCGCATCCT GAAGACCATC TGCAAGCTGT TCATCAGCGA GCGGCCGCTG
CAGTTCTTCT CGATCCTTGC GGCAGTGCTC GCGGCGGGCG CGATCGCGCT GGCCATTCCG
CTGCTGCTCA CCTACCTGCA CACCGGCCTG GTGCCCCGGC TCCCCACGGC GGTGCTGGCG
ACCGGCGCCA TGCTGGCCGC CATGCTGTCG ATGGTGTGCG GCGTCGTGAT GCACGCGATC
CGGCTCGCCC GCCGCGAAGC CAAGCGGCTG CGCTACCTCG CGATACCCGG CGTCGGGCAG
TTCCGCCGCA AGCCATGA
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| Protein sequence | MTDDNPSAAA RAPIRIAAVI PCYNEALSIA QVVAQFRAAL PEAEIHVFDN NSTDDTAAIA
RASGATVTHV AAPGKGNVVR RMFADVEADV YVTVDGDATY DVASAPRLVD ALVERNLDMV
VGCRVDDGQN ALTYRAGHRF GNRLLTGAVA QLFGGGLTDM LSGYRVFSRR YAKSFPALSQ
GFEIETELTV HALELRMPHA EFDTAYSTRP EGSHSKLSTY RDGWRILKTI CKLFISERPL
QFFSILAAVL AAGAIALAIP LLLTYLHTGL VPRLPTAVLA TGAMLAAMLS MVCGVVMHAI
RLARREAKRL RYLAIPGVGQ FRRKP
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