| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0172 |
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| Symbol | |
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| ID | 7971381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 175823 |
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| End bp | 177631 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790775 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942101 |
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| Protein GI | 239813191 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCTG CCGCGCACTA TGCGGCACTG GCGGTCTTTG TGCTTGGCTG CTGGGGCTTC
GGCCGCGCGC TGCTGGCGCG CCTGGCGCCG CCGCCGCGCC GGGACGCGGG GCTGGAGGCG
GCCATGGCGG CGGCCCTGGG CGTGGGCCTT TTCATCTGCG CCTTCCAGCT GCTCGCGATC
TTCGGCGCAT TCAAGCCGGG CGCCACCGTG GCACTGATCG CTGCCGGCGT GCTGGCGGCC
GCACTGCAGC TGCGGCCCTG GTGGCGCGAA GCGCGGGCGC TGCACGTCGC TGGTGCCCCC
GCCGCACCGT GGAGCCGCGC CGAAAGGATC GCCGCCATTG CGCTGGCCCT GGTGGCGCTG
CCCGCGCTGG TCGCGCCGCT CGCGCCGCCC GCCGCCTTCG ACGAGCTGAT GTACCACCTG
CCCTATGCGC GGCTGGTGGC GCAGCAGGGC TCGCTGGGCA TCCACGAGTG GCTGCGCTAC
CCCTGGTTCC CCTACAACTA CAACCTGCTC TATGCGGCCG CGCTGCAGCT GGGCGACGAC
GTGCTGCCGC ACTTCCTCAA TGCGCTGGCC GGAGTGATTT CGGCGGTGAT GGTCTACCGC
CTGGGCATCC AGCATGCGAA CCGGCTCACG GCCTGCATCG GCGCGGCCAT CTGGATCGGG
ATCGGCGACT ATTCGAACGC GCTGATCGAC ATGGGCGTGG CGCTCTTCGT GCTCAGTGCC
TGCGTGGCGC TGTGGTGGTG GCGTGAATCA GAGCCGCTGC CGGGCGGCAC GCGCTGGCTC
GGGCTGGCGG CGTTCTGCCT GGGCGTGGCC GCGGGATCCA AGTACCAGGC GCTCACCTTC
CTGCCGCTGG TGGCGCTGTT CGTGGTGTGG CGCGAGCGCC GGCCCAAGGC CTGGGCGCTG
GCGCTGCTCT GCTTTCTGGT TCCTTGCGTG TACTGGTACG CGCGCAACGC CATCATGACC
GGCGACCCGT TCAACCCCAT CGGCGCGCGC GTGTTCGGCT TCACCGACTG GATCCCGGCC
GACTACGTGC AGCAGGTGGC CGACGTGCGC GACCATGCGG CGCGGCCCAA CGCGCTGATC
TGGGCCGTGT TCCTGGCACC GTTCAGCCTG CTGTGGAAGC GCTCGGCCGC GCTGCGCGCC
GCGGGCTGGT TCTGCTTCTA TTCGGTGGCC GTGTGGCTCT TGACCTCGCG CTATCCGCGC
TACCTCACGG CCTCGTTCCC GCTGCTCGCG CTGATGGCGG CCATCGGCTG GCAGGTGCTG
TTCGGCGGGA TCGCTGCGGG CGTGCGCCGC GTCTTCGGGG CCAAGGGCGG GCCGGTGGAG
GCCGCGCCTG CCGCCGCCGC ACCCGCCGGA CGCCTGGCCC TTGCCGGCGA CTGGATCGTC
GTGCTGCTGC TGGCCGCGCT GGCCGCGGTG TCGCTGCGCC AGACCGCGGG CAAGGTGGCG
ATGATCTCGC CCACGCCCGA AACCCGCGAG GCTTTCCTGC GCCAGCATGT GCCGGGCTAT
GCCGCCATGG ACTACCTGCG CCAGCATGCC GACGGGCGCG TCTACCAGAT CGCGCTGAAC
GAGGCGATCT ACTACGGGCC CAATCCGATC TGGGGCGATA CGCTCGGCCC GTGGCGCTAC
CGCGATTTCC TGCTGCTGCT TCCGGGCGAC ATGGCGCGCA AGCTGGCCGC CAAGGGATTC
ACGGCCATCG TCATGCCGAC GTCGATGGTG CCCACGCTGG CCACGCGGCC CGGCTTCGAC
GAACATTTCG CCCTGCTGTA CGAAAAAGAC GGTGGCCGGG TCTACCGCAT TCTCTCGACC
GCACCATGA
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| Protein sequence | MFAAAHYAAL AVFVLGCWGF GRALLARLAP PPRRDAGLEA AMAAALGVGL FICAFQLLAI
FGAFKPGATV ALIAAGVLAA ALQLRPWWRE ARALHVAGAP AAPWSRAERI AAIALALVAL
PALVAPLAPP AAFDELMYHL PYARLVAQQG SLGIHEWLRY PWFPYNYNLL YAAALQLGDD
VLPHFLNALA GVISAVMVYR LGIQHANRLT ACIGAAIWIG IGDYSNALID MGVALFVLSA
CVALWWWRES EPLPGGTRWL GLAAFCLGVA AGSKYQALTF LPLVALFVVW RERRPKAWAL
ALLCFLVPCV YWYARNAIMT GDPFNPIGAR VFGFTDWIPA DYVQQVADVR DHAARPNALI
WAVFLAPFSL LWKRSAALRA AGWFCFYSVA VWLLTSRYPR YLTASFPLLA LMAAIGWQVL
FGGIAAGVRR VFGAKGGPVE AAPAAAAPAG RLALAGDWIV VLLLAALAAV SLRQTAGKVA
MISPTPETRE AFLRQHVPGY AAMDYLRQHA DGRVYQIALN EAIYYGPNPI WGDTLGPWRY
RDFLLLLPGD MARKLAAKGF TAIVMPTSMV PTLATRPGFD EHFALLYEKD GGRVYRILST
AP
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