| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0155 |
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| Symbol | |
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| ID | 7971691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 157080 |
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| End bp | 157958 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790758 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002942084 |
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| Protein GI | 239813174 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTT CGTCAAGTAA GGCCCTGCCG CAGGTGGCGC CGCGCGCGGC GGCGCCTGCA
TCGGCCGCAA CCCCCCAGGC CGCCGTGCCC GCGCGGCGCC GTTCGCTCGC GCCGCTCGAG
CCCGTCAGCG GGCGCGCCCG CGTGCTGCTC GGCCTCGGCT TCTTCGTGGC CTTCGTGCTC
GTGTGGTCCG TTGCCACGCT CGGCGGCTTC GTGCCGCCGA CCTTCCTGGC CAGCCCCGTG
ACCATGCTGA AGGAAGGCTG GATGCTGTTC GCCGAATTCG GCTTCATCGG CGACGTGGGC
ATGACCGTGT GGCGCGTGTT CGGCGGCTTC CTGCTGGCGG CCGTGCTGGC GGTGCCGCTG
GGCATTGCCA TGGGCACCTG GAAGGCCGTG GAGGCCTTCT TCGAGCCCTT CGTCTCGTTC
TGCCGCTACC TGCCGGCCTC GGCCTTCATT CCGCTGCTCA TCCTGTGGGC GGGCCTGGGC
GAGATGCAGA AGCTCTTGGT GATCTTCATC GGCTCGTTCT TCCAGATCGT GCTGATGGTG
GCGGTGACGG TGGGCGGCGC GCGGCGCGAC CTCGTCGAGG CGGCCTACAC GCTGGGTGCC
AAGAGCCGCG GCATCGTGGC GCGCGTGCTC ATTCCGGGCG CTGCGCCCGG CATTGCCGAG
ACGCTGCGCC TGGTGCTCGG CTGGGCCTGG ACCTACGTGA TCGTGGCGGA ACTCATCGGC
TCCTCGTCGG GCATCGGCCA CATGATCACC GACAGCCAGG CCTTGCTCAA CACCGGGCAG
ATCATCTTCG GGATCATCGT GATCGGCGTC ATCGGGCTGG TGTCCGACTT CGCTTTCAAG
GCGCTCAACC GCCGCATGTT CGCCTGGGCT GCACTCTGA
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| Protein sequence | MQASSSKALP QVAPRAAAPA SAATPQAAVP ARRRSLAPLE PVSGRARVLL GLGFFVAFVL
VWSVATLGGF VPPTFLASPV TMLKEGWMLF AEFGFIGDVG MTVWRVFGGF LLAAVLAVPL
GIAMGTWKAV EAFFEPFVSF CRYLPASAFI PLLILWAGLG EMQKLLVIFI GSFFQIVLMV
AVTVGGARRD LVEAAYTLGA KSRGIVARVL IPGAAPGIAE TLRLVLGWAW TYVIVAELIG
SSSGIGHMIT DSQALLNTGQ IIFGIIVIGV IGLVSDFAFK ALNRRMFAWA AL
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