| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0110 |
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| Symbol | |
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| ID | 7971646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 110587 |
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| End bp | 111351 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644790713 |
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| Product | 2-oxopent-4-enoate hydratase |
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| Protein accession | YP_002942039 |
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| Protein GI | 239813129 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00322536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCGG CGGCCGGCGG CCTTGCGCCC GCCAGCGCCG CGCACGCGCT GCACCTCGCG
CGGCGCGAGG GCCGGCGCGT GCCCTCGGCG CTGCTGCAGA CGGCCAGCCG CGCCGAGGCC
TATGCCATCC AGGACGCCAC GCTGGCGGCG ATCGGCCCGG TCGGCGGCTG GAAGGTGGGC
GCGCGCGCGC CCGGCCAGGA GCCCACCTGC GCGCCGCTGC CGGCCGAGGG GCTGCTGCCC
GGCGGCGTGC GCCTGCAGGG TCCGGCATGG CGGCTGCGCG GCATCGAGGC CGAGGTCGGC
TTCCAGCTGG GCGCCGACCT GCCGCCGCGC GCCGCGCCCT ACACGCTGGC CGATGTGGCA
GGCGCCGTCG AGTCGGTGCT GCCGGTGATC GAGGTCGTCG AGACCCGGCT GGCCGACTGG
TTCGGCGCCC ATGCCAACGC CCTGCTGGCC GACCTGCTGA GCCATGGCGC GCTGGTGCTG
GGGCAGCGCC AGCCCTTCGC GCCGGCCTGG TTCGACCTGC AGCGCGCCGA GGCCGCGCTG
CACTTCGACG GGCAGACCGT CGCGCACACC GTGGGCGAGC ATCCGAGCCC CGACGCGGGC
GCGCTGCTGG TGTGGCTGGC CAACCATTGC GCCGCGCGCG GCGCCGGACT CAAGGCCGGG
CAGATCGTCA CGAGCGGTTC GTGCACCGGC ATGCTGTTCG CGTCGGCGGG CACTGCCGTG
CGCGTGGAGA TCGGCGAGCT CGCGCCCGTG GCCCTCTCGT TCTGA
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| Protein sequence | MSAAAGGLAP ASAAHALHLA RREGRRVPSA LLQTASRAEA YAIQDATLAA IGPVGGWKVG
ARAPGQEPTC APLPAEGLLP GGVRLQGPAW RLRGIEAEVG FQLGADLPPR AAPYTLADVA
GAVESVLPVI EVVETRLADW FGAHANALLA DLLSHGALVL GQRQPFAPAW FDLQRAEAAL
HFDGQTVAHT VGEHPSPDAG ALLVWLANHC AARGAGLKAG QIVTSGSCTG MLFASAGTAV
RVEIGELAPV ALSF
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