Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0076 |
Symbol | |
ID | 7974034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 72342 |
End bp | 74144 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644790678 |
Product | putative potassium transport flavoprotein |
Protein accession | YP_002942005 |
Protein GI | 239813095 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.6979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGACC CGACCACCGG TCCCAACCGG GCCGCCGCCA CCTGGCTCGC CGACTTTGCC GCCGCCCTCG CGCGCGGCGA CGCCGATGCG GCCGTCTCGC TGTTCGAGGC CGACAGCTAC TGGCGCGACC TCGTCGCCTT CACCTGGAAC ATCCGCACGC AGGAAGGCGC CGATGCCATC CGCGCGATGC TGCAGGCGCG GCTGGCCGAC ACGCAGCCCG CGGCCTTTGC GCTGGAGGGC GAGGCGACCG AGGCCGACGG CGTGGTCGAT GCCTGGTTCA CTTTCGAGAC GCGCGTGGCG CGCGGCCGCG GCCACCTTCG GCTGCGTGGC GGCAAGGCCT GGACGCTGCT CACCACCATG ACCGAGCTCA AGGGCTTCGA GGAAAAGACG GGCGAGAACC GCATCAAGGG CGCGGAGCAC GGCGTGCACA AGGGCCGCAA GAACTGGCTC GAGAAGCGCC GCGACGAAGA GGCCGCGCTC GGCTACACCG AGCAGCCCGA GGTAGTGATC ATCGGCGGCG GCCAGGGCGG CATCGCGCTG GGCGCGCGGC TGCGCCGGCT GGGCGTGCCG ACCATCATCG TGGAGCGCAA CGCGAAGGCC GGCGACTCCT GGCGCAAGCG CTACAAGTCG CTGTGCCTGC ACGACCCGGT CTGGTACGAC CACCTGCCCT ACATGCCCTT TCCCGACGAC TGGCCGGTGT TCGCGCCCAA GGACAAGATC GGCGATTGGC TCGAGATGTA CACCAAGATC ATGGAGCTCA ACTACTGGAG CTCCACCCAC GCGAGGAAGG CCCGCTTCGA CGAGGCCGCG CAGCGCTGGG AAGTGACGGT CGAGCGCGAA GGCAAGCCGG TGGTGCTGCG GCCGAGGCAG CTTGTGTTCG CGCTCGGCGT CTCGGGCTAC CCGAACGTGC CGAAGATCGC GGGCGCAGAG AACTTCAAGG GCGACCAGCA CCATTCGAGC CAGCACCCCG GGCCCGAGGC CTATGCCGGC AAGAAGTGCG TGGTGCTGGG CTCGAACAAC TCGGCGCACG ACATCTGCGC GGCGCTGTGG GAGCACGGCG CCGACGTGAC GATGGTCCAG CGCTCGTCCA CGCACATCGC GCCGTCGCAG TCGCTGATGG AGCTGGCACT GGGCGGGCTC TACTCCGAGC AGGCCGTGAA GAACGGCATC GACCACCACA AGGGCGACCT GATCTTCGCC TCGGTGCCCT ACAGGATCAT GCACACCTTC CACATCCCGG TGTACGAGGA GATGAAGAAG CGCGATGCCG ACCTGTACGC GCGGCTCGAG AAGGCGGGCT TCCTGCTGGA CTTCGGTGTC GACGGCTCGG GACTCTTCAT GAAGTACCTG CGGCGCGGCT CGGGCTACTA CATCGACGTG GGCGCCTCCG AGCTGGTGGC CAACGGCAGC ATCCACCTGA AAAGCGGCGT GAACATCGAG CGGGTGAACG AGCGCTCGGT CACGCTGACC GACGGCACCG AGCTGCCGGC TGACCTGCTG GTGTACGCCA CCGGCTACGG CTCCATGAAC GGCTGGCTGG CCGACCTGAT CTCGCCCGAG ATCGCCGACA AGGTCGGCAA GTGCTGGGGC CTGGGCTCCG GCACGCCGAA GGACCCGGGC CCGTGGGAGG GCGAGCTGCG CAACATGTGG AAGCCCACGC AGGTCGAGCA CCTCTGGTTC CACGGCGGCA ACCTGCACCA GTCGCGCCAC TACTCGCAGT TCCTGGCGCT GCAGCTGAAG GCGCGCATGG AAGGCATCGA CACGCCGGTG TACGAGCGCG CGCCGTCGTA TCACACGCGC TGA
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Protein sequence | MTDPTTGPNR AAATWLADFA AALARGDADA AVSLFEADSY WRDLVAFTWN IRTQEGADAI RAMLQARLAD TQPAAFALEG EATEADGVVD AWFTFETRVA RGRGHLRLRG GKAWTLLTTM TELKGFEEKT GENRIKGAEH GVHKGRKNWL EKRRDEEAAL GYTEQPEVVI IGGGQGGIAL GARLRRLGVP TIIVERNAKA GDSWRKRYKS LCLHDPVWYD HLPYMPFPDD WPVFAPKDKI GDWLEMYTKI MELNYWSSTH ARKARFDEAA QRWEVTVERE GKPVVLRPRQ LVFALGVSGY PNVPKIAGAE NFKGDQHHSS QHPGPEAYAG KKCVVLGSNN SAHDICAALW EHGADVTMVQ RSSTHIAPSQ SLMELALGGL YSEQAVKNGI DHHKGDLIFA SVPYRIMHTF HIPVYEEMKK RDADLYARLE KAGFLLDFGV DGSGLFMKYL RRGSGYYIDV GASELVANGS IHLKSGVNIE RVNERSVTLT DGTELPADLL VYATGYGSMN GWLADLISPE IADKVGKCWG LGSGTPKDPG PWEGELRNMW KPTQVEHLWF HGGNLHQSRH YSQFLALQLK ARMEGIDTPV YERAPSYHTR
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