| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0072 |
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| Symbol | |
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| ID | 7974030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 68562 |
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| End bp | 69503 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790674 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_002942001 |
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| Protein GI | 239813091 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.867637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCGA CTCCTCAACG CGTCGCGGTG GTTGCCACCG GCGTCATCGG CGCCAGCTGG
GCCGCCTACT TCCTCGCGCG CGGCCTCGAC GTGGAGGCCA CCGACCCCTC GCTCGATGCC
GAGGCGCGGC TGCACGCGGC CGTGGCCGCG CACTGGCCCA CGCTGGAGCG CTTCGGCCTG
GCGACCAGCG CCTCGCCCGG GCGGCTGCGC TTTCATGCGC GGCTCGAAGA CGCGGTGGCG
CAGGCCGACT TCGTCCAGGA AAGCGGCCCC GAGCGGCTGG ATTTCAAGAC CGGCCTGTTC
CGGCGCATGG ACGAGGCCGC GCCGGCCCAC GCGATCCTGG CGTCGAGCTC CTCGGGGCTC
GCGATCAGCG CGGTGCAGGC CGAATGCAAG CATCCGGAAC GCGTGGTGCT GGGCCATCCC
TTCAACCCGC CGCACCTGAT CCCGCTGGTG GAGGTGGTCG GCGGCGAGCG CACCTCGGCT
CAGGCCATCG AACGCGCGAT GGCCTTCTAC GCCGCCATCG GCAAGCGGCC GATCCATGTG
AAGCGCGAGG TCAAGGGCCA CATCGCGAAC CGGCTGCAGG CCGCGCTCTG GCGCGAGGCC
TTCCACCTGG TCGACGAGGG CGTGGCGAGC GTGGCCGACA TCGACACCGC CATTGCGCAC
GGCCCCGGCC TGCGCTGGGC GGTGATGGGG CCGTTCATGA ACCTGCATCT TTCGGGCGGC
GCGGGCGGCA TCGAACATGT GCTCGCGCAC CTGGGCGGAC CGATCGAGGA CTGGTGGAAG
GACCTGGGCG CGCCGTCGAT GACGGAAGAA CTCAAGCAGA AGGTAGCCGA GGGCGTGGCC
GCAGAACTGG GCGCCCGGCG CGTGGCCGAG CTCGAGGTTG CGCGCGACAT GCTGCTGTTA
GACCTGATTC GCGCCAAGGC CGACACCGGC AGACTCGATT GA
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| Protein sequence | MEPTPQRVAV VATGVIGASW AAYFLARGLD VEATDPSLDA EARLHAAVAA HWPTLERFGL
ATSASPGRLR FHARLEDAVA QADFVQESGP ERLDFKTGLF RRMDEAAPAH AILASSSSGL
AISAVQAECK HPERVVLGHP FNPPHLIPLV EVVGGERTSA QAIERAMAFY AAIGKRPIHV
KREVKGHIAN RLQAALWREA FHLVDEGVAS VADIDTAIAH GPGLRWAVMG PFMNLHLSGG
AGGIEHVLAH LGGPIEDWWK DLGAPSMTEE LKQKVAEGVA AELGARRVAE LEVARDMLLL
DLIRAKADTG RLD
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