Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0037 |
Symbol | |
ID | 7973995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 38774 |
End bp | 40186 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644790639 |
Product | histidine kinase |
Protein accession | YP_002941966 |
Protein GI | 239813056 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.365028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCGCA CGCAGCCGGC CGCGCCCGGG CCATCGAAGG CAGCGCCTTC GCTCACGCGG CGCGTGCTGC GCAACGTGCT GGTGCCGCTG GCGCTCACGT GGATGGTGGG CGCGGTGATC GCGCTGGTCA TCGCCAACTA TTTTTCCGAG CAGGCCTTCG ACCGCGCGAT GCTCGACGAC GCCTATGCGC TTTCGGCCAA CGTGCAGGCG GGCGAGCGCG GCATCGAGCT GCTGCTTACG CCGCGCGAAG TGGCCACGGT GCTGTTCGAC CAGGTCGACA AGATCTACTT CGCGGTGCAG CGGCTCGACG GCACGCTGAT CTCGGGACAG CCGGGCCTGA CTGCGCCGCT GCCCACGGGC GATGCGCGCT ACCGCTTCTC GGACGTCAAC TTCGATGGCA AGGTCCTGCG CGCGGTGGTG CTCGAGCCGG TTGCCGAGGC GGGCACTCTG ATGCCCTACC GGGTGGTGAT TGCCCAGACC ACGCTGAGCC GCGCGGCGCT GGTGCAGCGG CTGCTCGGCT ATGCGCTGGC GCCGCAGGTG CTGCTGCTGG TTCTGCTCGC GGTATGGCTC TGGCATGGCA TTCGCAGCGA CCTGCGTCCG CTCGGCGAAC TCCAGCAGGC GCTGGACCGG CGCGATGTGT ACGACCTCTC CCCGGTCGCG GTGGTGCGCA CCTCGCGCGA GGTGCAGCGC CTGGGCGATG CCGTCAATGC GCTGTTCGAC CGGCTGAACC ACAGCGTGCG TGCGCAGCGC GAGTTCGTGG GCAACGTCGC GCATGAGCTG CGCACGCCGC TCGCGGGCAT TCGCGCACTG GCCGAATACG GGCTCGCGCA GCACGACTCC ACCGTGTGGC GCGAGCAGCT CGCGCGCGTG GCCGAGCGGC AGGCGCGCGC GAGCCACCTG ATCGACCAGC TGCTGGCGCT CGCGCTCGCG GATGAAGCGC GCACCGGCCT CGCGCGCGAG CCGGTGCGGC TCGACATGCT GGCCGAGCAG ACGGTGCTGC GGCACCTGGC CCGCGCCGAC GCGCACGGCG TCGACCTGGG CGCGCGCGGC CTCGACGAGC GCGTGACGGT GCTGGCCAAC GAAGCGCTGG TCGAGGGCAT TCTCGACAAC CTGATCGACA ACGCGCTGCG CTACGGCGGA CGCACCATCA CCGTCGAGCT GGCGGGCCGC ACCCTGAGCG TGATCGACGA CGGCCCCGGC ATTCCGCTGG AAGCGCAGCG CGACCTGATG CAGCGCTGGT CGCAGGGCCC GGCGGGCCAG AAGCTCGGGC AGGGCTCGGG CCTGGGCCTG TCGATCGTCG CGCGCTATGC GGAGCTGCTG GGCGCCGAGC TGCGGCTCGA TGCGGCCGAG CCCACGGGGC TGCGCGTGAG CATCAGCTTC GCGGAACTGC GCCTGGCGGC GGCCGGCGAT TAA
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Protein sequence | MSRTQPAAPG PSKAAPSLTR RVLRNVLVPL ALTWMVGAVI ALVIANYFSE QAFDRAMLDD AYALSANVQA GERGIELLLT PREVATVLFD QVDKIYFAVQ RLDGTLISGQ PGLTAPLPTG DARYRFSDVN FDGKVLRAVV LEPVAEAGTL MPYRVVIAQT TLSRAALVQR LLGYALAPQV LLLVLLAVWL WHGIRSDLRP LGELQQALDR RDVYDLSPVA VVRTSREVQR LGDAVNALFD RLNHSVRAQR EFVGNVAHEL RTPLAGIRAL AEYGLAQHDS TVWREQLARV AERQARASHL IDQLLALALA DEARTGLARE PVRLDMLAEQ TVLRHLARAD AHGVDLGARG LDERVTVLAN EALVEGILDN LIDNALRYGG RTITVELAGR TLSVIDDGPG IPLEAQRDLM QRWSQGPAGQ KLGQGSGLGL SIVARYAELL GAELRLDAAE PTGLRVSISF AELRLAAAGD
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