| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0026 |
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| Symbol | |
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| ID | 7973984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 28221 |
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| End bp | 29663 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790628 |
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| Product | sensory histidine kinase CreC |
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| Protein accession | YP_002941955 |
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| Protein GI | 239813045 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTCGGC GCACGCGGAT TTTTATCGGC ATCCTGCTGA TCTACACGGC GGGCATCGCC
TTCCTGCTCT ACCGCGTGGT GTCGGACATC GATCCGCGCT ACCGCGAATC GGCCGAGGAA
TCGCTGGTCG AGACTTCGCA GCTCGTGGCC AGCCTGGTCG AGCAGGACGT GATCGCGGGC
GCCCTCAACA CCGCGCGGCT GGAGCCGCTG TTCCGCACGG TCTATGCGCG CGAGTTCTCC
GCGCAGATCT ACAACCTGCA CAAGAACCGC GTCGAGCTGC GCGTGTACGT CACCGACCGC
AGCGGCCGCG TGGTGTTCGA TTCGCTCGGC CGGCACCTGG GCACCGACTA TTCGCAGTGG
AGCGACGTGA GCCGCACGCT CGCCGGCCTG TACGGTGCGC GCACCTCGCG CGACGTCGAC
GGCGACCCGC GCACTTCGGT GATGTACGTG GGCGCGCCGA TCCGGTGGAA CAACGAGATC
GTCGGCATGG TCAGCGTCGG CAAGCCGGTG CAGAGCTTCG GCCAGTTCGT GGAGGACGCG
CGCGCCCGCA CGCTGTGGGT GGGCGTGGGA TCGGGGCTGG CGCTGCTGCT GCTGGCGGTG
ATCGTCTCGG TCTGGCTGGT GCGGCCTTTC GGGCTGATCT CGGACTACTG GGCCTGGGTG
CGCGCGCAGC GCACGCTGAG CCTTTCGCGC ATGGCGCGGC GCGCGGTCGA TGCGGTGCGC
ACCGGCTTCA GCGAAATGCG CGATGCGCTG ACCGGCCGCA ACTACGTGGC CGACTACGTG
CAGACCTTCA CGCACGAAGT GAAGAGCCCG CTCTCGGCGA TCCGCGGCGC GGCCGAGCTG
CTGCAGGAGC CGTCGATGCC GCATGCCGAG CGCGAGCGCT TCCTGAAGAA CATCGAACGC
GAAACGCAGC GCATCCAGGA AATCGTCGAC CGCATGATGG AGCTCACCGC GCTGGAAACC
CGCCACGGGC TGGACCGCAC GGAGCCGGTG GCGCTGGCTT CGCTGATCGA GGACATCGCG
ATCAGCGCGC AGCCCGCGGC GGCCAAGCGC AACATCGGCG TGCGCGTGAA CATCCGCGCC
GAGGCGCGCG CGGAGGGCGA CCCCTTCCTG CTGCGGCGCG CCATCAGCAA CCTGCTGGAC
AACGCGATCG ATTTTTCACC GCAGGGCAGC GAGGTGCTGC TGACGCTGGA GACCACCTCG
AAGCTCGCGC GCGTGAGCGT GCGCGACCAT GGCCCGGGCA TTCCGGACTA CGCACAGGAA
AAGGTCTTCC AGAAGTTCTA TTCGCTCGCG CGGCCGCACA GCCAAAAGAA GAGCACCGGG
CTCGGGCTGG CCTTCGTGAA GGAGATTGCC GCGCTGCACC GCGGGCGCAT CGAGCTCGGC
AATGCGGCGC GCGGCGGCGC GGTGGCCACG CTCACGCTGC CGCTGCTGCC GTCACACCAC
TGA
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| Protein sequence | MSRRTRIFIG ILLIYTAGIA FLLYRVVSDI DPRYRESAEE SLVETSQLVA SLVEQDVIAG
ALNTARLEPL FRTVYAREFS AQIYNLHKNR VELRVYVTDR SGRVVFDSLG RHLGTDYSQW
SDVSRTLAGL YGARTSRDVD GDPRTSVMYV GAPIRWNNEI VGMVSVGKPV QSFGQFVEDA
RARTLWVGVG SGLALLLLAV IVSVWLVRPF GLISDYWAWV RAQRTLSLSR MARRAVDAVR
TGFSEMRDAL TGRNYVADYV QTFTHEVKSP LSAIRGAAEL LQEPSMPHAE RERFLKNIER
ETQRIQEIVD RMMELTALET RHGLDRTEPV ALASLIEDIA ISAQPAAAKR NIGVRVNIRA
EARAEGDPFL LRRAISNLLD NAIDFSPQGS EVLLTLETTS KLARVSVRDH GPGIPDYAQE
KVFQKFYSLA RPHSQKKSTG LGLAFVKEIA ALHRGRIELG NAARGGAVAT LTLPLLPSHH
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