| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0011 |
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| Symbol | |
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| ID | 7973969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 11137 |
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| End bp | 12108 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644790613 |
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| Product | hypothetical protein |
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| Protein accession | YP_002941940 |
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| Protein GI | 239813030 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0392] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCT CCACTGCGAA GCCCGCGCAC CGGCCCTGGT GGCCCTGGCT GCGGCGCATC
GCGGTCTGGG CCTTCTTCGG CCTGATCGCC TGGCTGCTCG TGAGCCAGGC GCGTGCCATC
GACTGGCAGG AGGTGTTCGA CGCCATGCGC GCGCTGCCCG CGGCCACGCT GTGGCTGGCC
GGTGCGCTGG CCGCCGGCAG CTTTGCCACC TACAGCACCT ACGACCTGCT GGGCCGCCAT
CTCACGCGCC ACCCGCTCGG CGCCCGCACC GTCATGGGCG TGACCTTCAT CAGCTATGCC
TTCAACCTGA ACCTCGGTTC ACTGGTGGGC GGCGTGGCGT TCCGCTACCG GCTCTATTCG
CGGCTGGGCC TTCCCAACGG CACCATCACG CGCGTGCTCG GCTTCAGCAT GCTGACCAAC
TGGCTCGGCT ACCTGGTGGT GGCGGGAGTG GCCTTCTGCT TCTGGCCGCT GGTGCTGCCG
GCCGAATGGA AGGTCGGCAA CGGCGGGCTG CGCATCCTGG GCGCGGTGCT GCTGCTGCTG
GCCGCGGGCT ACTTCGTGCT GTGCGCCCTG GCCAGCGGGC ACGTGTTCCG GCTGCGCCAC
TATCCGTTCA AGGTGCCGTC CCTTCGGATG GCCTGGCTCC AGCTGGCCCT GTCGTGCCTG
AACTGGGCGC TGATCGGCAG CGTGATCTGG GTCCTGCTGC AGGGCGCGGT GGCCTACCAC
ACGGTGCTCG CGGTGCTGCT GGTGGCCGCG GTGGCCGGCG TGGTCACGCA CGTGCCGGCG
GGCCTGGGCG TGCTGGAGGC GGTGTTCCTT GCGCTGCTCT CGCATGAGGT GGCGCAGGGC
CGGCTGCTGG GCGTGCTGCT GGTCTACCGC GGGCTTTACT ACCTGTTGCC GCTCGGCGTG
GCCACGGTGG CGTACTTCGT CACCGAGCTG CGTGCGCGGC GCTGGCGGCA TGCCGCGCCG
CTGAAGCGCT AG
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| Protein sequence | MSISTAKPAH RPWWPWLRRI AVWAFFGLIA WLLVSQARAI DWQEVFDAMR ALPAATLWLA
GALAAGSFAT YSTYDLLGRH LTRHPLGART VMGVTFISYA FNLNLGSLVG GVAFRYRLYS
RLGLPNGTIT RVLGFSMLTN WLGYLVVAGV AFCFWPLVLP AEWKVGNGGL RILGAVLLLL
AAGYFVLCAL ASGHVFRLRH YPFKVPSLRM AWLQLALSCL NWALIGSVIW VLLQGAVAYH
TVLAVLLVAA VAGVVTHVPA GLGVLEAVFL ALLSHEVAQG RLLGVLLVYR GLYYLLPLGV
ATVAYFVTEL RARRWRHAAP LKR
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