Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_p54_03 |
Symbol | |
ID | 6989606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011315 |
Strand | + |
Start bp | 3432 |
End bp | 5360 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | acyltransferase |
Protein accession | YP_002265402 |
Protein GI | 209809835 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.362945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTC GGTATGACAT TAATGGTTTA AGAGCAATTG CAGTGATCGC AGTGGTTCTT TTCCATTTTA ACCCTGCTTG GGTTCCCGGT GGTTTCGCTG GCGTAGATGT GTTCTTTGTG ATTTCAGGAT TTCTGATGAC AAGTATTATC TTTCGAGGGT TAGATAATGA TAATTTTAAC TTGTTTAAGT TCTACGTAGC TCGAGCCAAT CGAATAATTC CAGCTCTTGC TGTTTTATGT TTGGTTCTTA TGGTCTTTGG TTGGTTCTAT CTTAACCCGT TGGATTACAA AGCCCTCGGT AAGCATGTTG CTAGTAGTAT GGGTTTTCTT TCTAATATTA TTTATTGGAG AGAATCTGGA TACTTTGATG CAGCCTCTCA TGAGAAATGG CTGTTACATA CATGGTCATT ATCTGTTGAA TGGCAGTTCT ACATTATCTA TCCAATTGTA TTAGTAGCAC TTAAGAAATT TTTATCTCTT GAAAACTTAA AGCGATTAAT TGTTATTGGG ACAGTTTTAG GTTTTTGTCT AAGTGTTATC GCAACAATGA AGTGGCCAAA CCCAGCGTAC TATCTTCTTC CAACAAGAGC TTGGGAAATG ATGATGGGGG GTGTGGCGTT TCTTTATCCT TGGAACTTGT CTGAAAGTAA AAAGAAAATC ATAGAGGTTA CAGGCCTAGC TCTAATCCTA GGTTCGTATG CTTTTGTTTC TAGTGATGTG TCATGGCCAG GATATCTTGC TTTGCTTCCA GTCCTTGGTG CTTATCTTGT GATTGTTGCA AATCAGCAGT CTAGTTTTAT TACTAATAAC TATCTATTCC AAAACTTAGG GAAATGGTCA TATTCAATTT ACTTGTGGCA CTGGCCTGTT GTTGTTGCAG GGATCTTTTT TGAGTATAAA AGTTTTGAAT TGGCAGGTGT TTTTCTATCA GTTGTTTTAG GCTTTTTAAG TTTTAAATTT ATTGAGAGTG CTAATTTCCC ATCTTTTGAA AGGTGGTCTG ATGCACTAAA AGTAAAACCG TTGCACTTCA CTCTTATGCT AGGTTTTATT GGCTCTTTGG TGTTTGTGTT TAGGCCTAAC CAATTTTTAT TTCCAATGAA AGAGTCGGTG CTTAACTCTA TAGAAAGAAA ACCTTATGAA TGTTTCGATA AAGAAATGAT GCATGAGAAT GATGATGTTG TTTGCCAATT AACTAAAGGT GAATCAGCTA TTCTTGCGAT TGGTGATTCT CACTCATACT CATCACTTCC CGCTATTGAA TCTATTGCTA AGAGCAACAA CTTAGAACTT TATTACACAG GGTTTAATGG CTGCCCTCCT ATCATCGGAG TATCTCCAAT TCGAGGTGAT CAGCATTTAA AGAACTGTAA AATTTTGAAT CAAAGAGCAT TAGACTTTGC GTTGGGTAAG CAAGTTAAAA CCGTATTTTT AGCTGCTCGA TGGACGTACT ATACGGAAGG GACATACTCA AAAACGGGTG TTCAATACTT AACTATTGAT AATAATGAAC GTGGCTTAGA TGTATCAAAA AGAGCACTAA TGACAGGGCT TAAAGATACA TTTAAGGCTT ATTTTGATAA TGGCATAAAT GTTGTTGTAA TGCTTCAGGT TCCAATGCAG AAGCATGATC CAGATAAGAT TTATTATCGA TCGATATCTA ATGGAAAGCT ACTAACTTCA AAGTTAGCTA AAAACTCAAT TTCTTTAGAA GAACATGTTA AATTTCAATT TGAAACCAAT CATTTAATTA AGTCACTAGC TGTTTCCTAT CCGAATGTGA CTATTTACGA TCCTACTTCA GATATGTGTG TCGAAGGACA ATGTTTGGTA GGTAGTGTAG ATGTTTCTTA TTATTTTGAT GATGACCACT TGTCTATTCT TGGTGCTAGA AAGTTAGTTG AACCAATTAG TAAGTTTTTA GTCGATTAA
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Protein sequence | MNFRYDINGL RAIAVIAVVL FHFNPAWVPG GFAGVDVFFV ISGFLMTSII FRGLDNDNFN LFKFYVARAN RIIPALAVLC LVLMVFGWFY LNPLDYKALG KHVASSMGFL SNIIYWRESG YFDAASHEKW LLHTWSLSVE WQFYIIYPIV LVALKKFLSL ENLKRLIVIG TVLGFCLSVI ATMKWPNPAY YLLPTRAWEM MMGGVAFLYP WNLSESKKKI IEVTGLALIL GSYAFVSSDV SWPGYLALLP VLGAYLVIVA NQQSSFITNN YLFQNLGKWS YSIYLWHWPV VVAGIFFEYK SFELAGVFLS VVLGFLSFKF IESANFPSFE RWSDALKVKP LHFTLMLGFI GSLVFVFRPN QFLFPMKESV LNSIERKPYE CFDKEMMHEN DDVVCQLTKG ESAILAIGDS HSYSSLPAIE SIAKSNNLEL YYTGFNGCPP IIGVSPIRGD QHLKNCKILN QRALDFALGK QVKTVFLAAR WTYYTEGTYS KTGVQYLTID NNERGLDVSK RALMTGLKDT FKAYFDNGIN VVVMLQVPMQ KHDPDKIYYR SISNGKLLTS KLAKNSISLE EHVKFQFETN HLIKSLAVSY PNVTIYDPTS DMCVEGQCLV GSVDVSYYFD DDHLSILGAR KLVEPISKFL VD
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