Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II1080 |
Symbol | |
ID | 6962462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 1176491 |
End bp | 1177060 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643382320 |
Product | membrane protein |
Protein accession | YP_002265351 |
Protein GI | 209809812 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATG TCGTGAGTGT ACTAGCCATA TCAATAACCA CCGTCGCCTT AGCGGAAATC GGTGATAAAA CCCAACTCCT CTCTTTACTG CTTGCCAGTA GATACCGAAA ACCAATCCCT ATTATTGCTG CGATCTTTTT TGCAACTCTG TTAAACCACA CCTTAGCCGC CTATTTAGGG GTTGTCGTTG CCGATTACCT AACACCTGAA ACCTTAAAGT GGGCTCTAAT TATCAGCTTT GTCATAATGG CTGGTTGGGT CTTGATCCCA GATAAATTGG ATGATGACGA AAAAATCTCA AACCGAGGTC CTTTTGTTGC CAGTTTCATT GCCTTTTTCA TTGCTGAAAT TGGGGACAAA ACTCAAATAG CCACTTCCAT TTTAGGCGCT CAAAATGCCG ATGCCCTTAG TTGGGTTATT CTGGGTACGA CAATAGGTAT GTTATTGGCG AATGTGCCCG TTGTTCTAAT TGGTAAATTT TCTGCTGATA AGTTGCCATT AACCTTAATT CACCGCGTAA CGGCAGTGAT TTTCTTAGGG TTAGCCGTAG GCACTTTCTT TGGTATGTAA
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Protein sequence | MSNVVSVLAI SITTVALAEI GDKTQLLSLL LASRYRKPIP IIAAIFFATL LNHTLAAYLG VVVADYLTPE TLKWALIISF VIMAGWVLIP DKLDDDEKIS NRGPFVASFI AFFIAEIGDK TQIATSILGA QNADALSWVI LGTTIGMLLA NVPVVLIGKF SADKLPLTLI HRVTAVIFLG LAVGTFFGM
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