| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1077 |
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| Symbol | sdaA |
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| ID | 6962386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1172856 |
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| End bp | 1174232 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643382318 |
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| Product | L-serine dehydratase |
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| Protein accession | YP_002265349 |
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| Protein GI | 209809810 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit
[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATGC TGTCTATCTT TGATATCTAC AAAATCGGTG TTGGGCCATC TAGCTCACAC
ACAAATGGTC CTATGATTGC GGGGTATAAT TTTACCCAAC TTATCCAACC TCATTTAGAT
CAAGTGGCTC GCGTGCAGGT GGATCTTTAT GGTTCTCTTT CATTAACGGG GATTGGTCAC
CATACCGATC GCGCAACCAT TTTAGGTTTA CTAGGTAACC GTCCAGATAC CATCAAGATA
ACCAGTGCAA ACTTGGCAAT GAAAAAAGCC ATTGAAGATA AGGTATTGCA TATCGCAGGT
GCTCACGAAA TCACCTTTGA TTATGAAACT GATATGCTTT TTCATAAAAC CAATTTGCCA
TTACACGAAA ACGGCATGAC GATTTCAATC TTTGATGCCG CAGGCCAACA ACTGGCTATA
GAAACTTACT ATTCCGTAGG CGGCGGATTT ATTGCAACCG CTGATGAGCT AACTAATGGC
AAAAGCGCGA CGGGTGTTGA AGTCGAGTTC CCATTCAAAT CTGCGGACGA GATGCTAGAA
AAAGCTGAGA AGCAAGGCCT AAGCTTAGGC AGCTTTATTC TGCGTAACGA AGTTTCTTTT
CAACCAATGG AAGCGATTGA TGCGAAAGCC GACCAAATTT GGAAAGTCAT GTCATTGTGT
ATGGAACGAG GTTTCCAAAC CGAAGGCATT CTTGACGGTG GCTTAAACGT GGTTCGTCGT
GCGCCTGCAT TATTAAAAAA ACTGGAAGCA AATGCTTCTA TTGAAAGTGA TCCTATGGAA
ATCATGGATT GGATTAACTT ATTCGCGTTT GCGGTAAGCG AAGAAAACGC GGCGGGTGGC
CAAGTGGTTA CCTCCCCAAC TAATGGTGCG GCAGGTGTTA TTCCTGGTGT ACTGATGTAT
TACCATCGCT TCATTAAAGA GCTAGACACT AAGCAACTGA AAGATTTCTT AGCGGTATCT
GGTGCCATTG GTATTTTATA TAAAACCAAT GCGTCTATTT CTGGGGCTGA AGTGGGTTGT
CAGGGTGAGG TTGGTGTTTC ATCATCAATG GCTGCCGCTG GCTTAACGGC ACTTCGCGGT
GGCAGTAATG AGCAAATTTG TATGGCAGCT GAAATTGCGA TGGAACATTC GTTAGGTATG
ACGTGCGACC CAATCGGCGG TCTTGTTCAA GTGCCTTGTA TTGAACGTAA TGCAATGGGC
TCAATGAAAG CAATTAACGC CTCTCGTATG GCTCTTAAAC GCACAAGTAA GTGTCTTATC
TCGCTCGATA AAGTGATCGA TACCATGTAT CAAACAGGTA AAGACATGAA CCGTAAATAC
CGTGAAACCT CTCTGGGTGG TTTGGCGTTA ATTCACATGG CACCACCGTG TGAATAA
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| Protein sequence | MSMLSIFDIY KIGVGPSSSH TNGPMIAGYN FTQLIQPHLD QVARVQVDLY GSLSLTGIGH
HTDRATILGL LGNRPDTIKI TSANLAMKKA IEDKVLHIAG AHEITFDYET DMLFHKTNLP
LHENGMTISI FDAAGQQLAI ETYYSVGGGF IATADELTNG KSATGVEVEF PFKSADEMLE
KAEKQGLSLG SFILRNEVSF QPMEAIDAKA DQIWKVMSLC MERGFQTEGI LDGGLNVVRR
APALLKKLEA NASIESDPME IMDWINLFAF AVSEENAAGG QVVTSPTNGA AGVIPGVLMY
YHRFIKELDT KQLKDFLAVS GAIGILYKTN ASISGAEVGC QGEVGVSSSM AAAGLTALRG
GSNEQICMAA EIAMEHSLGM TCDPIGGLVQ VPCIERNAMG SMKAINASRM ALKRTSKCLI
SLDKVIDTMY QTGKDMNRKY RETSLGGLAL IHMAPPCE
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