Gene VSAL_II0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0982 
Symbol 
ID6962294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand- 
Start bp1073092 
End bp1073763 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content44% 
IMG OID643382237 
Producthypothetical protein 
Protein accessionYP_002265268 
Protein GI209809729 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAC ACACTGACTT ATCGCTACAA GCGAACGCTT TTTTCACGGC ATCAACGTGG 
GTCCCATCCC CTATTAAAGA GGTAACACGT AAGATGTTAG AGCGTGATGG TGGTGAGATT 
GCAACAGCCA CCTCTCTAGT AAATTATGAA TCTGACAGTT ATTTTTCTTC TCATGTTCAT 
ACTGGCGGCG AAGAGTTTTT AGTATTAGAA GGCATTTTTG CAGACGAGCA TGGTGACTAC 
CCTGTTGGTA CTTACATGCG CAACCCAGTA GGAACATCAC ACGCTCCGGT TGTGAAAGAT 
GGCTGCATGA TTTTAGTCAA GCTAGGGCAA TACCAAGACG GTGACAACAC GCCCGTTCAT 
ATTGATACCC AAACTCAGCC CGTTAGCAAC GACTCGACAC GTCATGGGGT TCAATTTCAA 
CTATTGCACA CCTTTAAACA TGAGGTAGTT CGCCTTGAGC AATGGCAAGC CAATCAGACC 
ATTGAACTTG AAAACCAAGG TGGAATAGAA ATACTGGTCA TTGATGGATC ATTTATCCAT 
GAGCACACCA ACTATGAAAA ATTTGATTGG CTTCGCTTGC CTATTGGCGA TTCATTGCAA 
GCAACCATCG GGCAGCACAA CTGTACCGTC TGGATAAAAA CAGGCCACCA CATACACCAA 
ATTCAAGCAT AA
 
Protein sequence
MKLHTDLSLQ ANAFFTASTW VPSPIKEVTR KMLERDGGEI ATATSLVNYE SDSYFSSHVH 
TGGEEFLVLE GIFADEHGDY PVGTYMRNPV GTSHAPVVKD GCMILVKLGQ YQDGDNTPVH 
IDTQTQPVSN DSTRHGVQFQ LLHTFKHEVV RLEQWQANQT IELENQGGIE ILVIDGSFIH 
EHTNYEKFDW LRLPIGDSLQ ATIGQHNCTV WIKTGHHIHQ IQA