Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0946 |
Symbol | |
ID | 6962268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 1035539 |
End bp | 1036426 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643382205 |
Product | integral membrane protein |
Protein accession | YP_002265236 |
Protein GI | 209809697 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0455522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACTA AATACGTCCC TTTTATCTTC GTTGCCTTAT GGAGTACTGG TTTTATCGGT GCTCAGTATG GACTACAGTT TGCAGAGCCT GCAACTTTCC TTCTTCTTAG AATGATCGCG AATATTATCA TTTTCATTGC TCTGTTATTC ATATTCAAAT CTCACCTTCC AAGAGGAAAA GAAGCCATTC ACTCTTTGAT TGCTGGCGTA TTAATTCATG GGTTCTATTT GGGTGGCACC TACCAAGCGA TTTCTCTTGG CATGTCGGCT GGCTTATGTG CGTTATTAGT GGGTATTCAG CCTATTCTTA CCGCTGTATT GTTGGTTAAT TTTGGTAAAC AACGTTTACT TCCCCTGCAA TGGGTCGGTC TATTCCTTGG CTTACTAGGG ATCACGTTGG TACTGCAAGG TAACATGGAA TGGCAAGACA CAAGCAATCA ATACACAGCG TATCTTTTTG CCTTCATTGC CTTAATTGGT ATTACTTTTG GCACGTTATA TCAAAAGAAA TACTGCCAGA ATTCAGATCT CATTGGCAGT ATGGTGTGGC AATACAGCGC TGCCTCATTG GTTTTTTTAC CTGTCGCGTT ATTAAATGAA ACGATGGTAG TGACATGGAA TGCGCAATTC ATTTTTGGAT TAATGTGGTT AGTGTTAGTT GTCTCAGTTA CGGCTATTCT ATTGTTGCTT TATATGATCA AACAAGGTGA TTCTTCAAGT GTGGCTTCTA CCTTTTACCT CATTCCGCCA ATGACGGCAT TTCAAGCATG GATAATCTTT GGTGAACACT TTGATACGCA AGGGGCAGTA GGGTTCGCGC TTGCGGCTAT TGCGGTCTAT TTAGTAATAA GAAAACCCAA AGTACACTTA GTGGAAGCCA TTAAATAA
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Protein sequence | MLTKYVPFIF VALWSTGFIG AQYGLQFAEP ATFLLLRMIA NIIIFIALLF IFKSHLPRGK EAIHSLIAGV LIHGFYLGGT YQAISLGMSA GLCALLVGIQ PILTAVLLVN FGKQRLLPLQ WVGLFLGLLG ITLVLQGNME WQDTSNQYTA YLFAFIALIG ITFGTLYQKK YCQNSDLIGS MVWQYSAASL VFLPVALLNE TMVVTWNAQF IFGLMWLVLV VSVTAILLLL YMIKQGDSSS VASTFYLIPP MTAFQAWIIF GEHFDTQGAV GFALAAIAVY LVIRKPKVHL VEAIK
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