Gene VSAL_II0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0917 
Symbol 
ID6962245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand- 
Start bp1003831 
End bp1004397 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content34% 
IMG OID643382182 
Producttransposase 
Protein accessionYP_002265213 
Protein GI209809674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA ATAATTTCAG TAATATATTG AATTCATTGA TTGAAATGGA ACGTACGAAT 
AAATGTGAAC TCTTTTATTT TGATGAGTCA GGCTTTAGTC AGAAATCTAA TCTTCCTTAT 
TGTTGGGGAC CTATCGGTGT TCAATCGCTA AGGCCTGCTC ATTCACACAG CAAACGGCTC 
AATGTTCTTG GCTTCTTAAG TAGACAAGGT AAATTGAGTT TTCAAACAAC GGAAGGAAGA 
GTAACTACCG ATACAGTAAT TGATGCATTT GAGCACTTTA TCAACGCACG AAAAAACGAT 
AAGCCATGCT TTATTATCTT AGATAATGCC TCTTTTCATA GGTCAGCAAA ATTTAAACAA 
AAATTGCATG AGTGGTTGAT GAATGATGTA TTAGTTTGTT ATCTACCACC GTACTCTCCA 
GAGCTCAATA TCATTGAGAT ATTGTGGAAG AAAGTAAAAT ATGAATGGTT ACCATGTGAA 
GCGTTCAAAA CGTTTGAAGA CCTCAGTATT AACATCAAAA ACATATTAAA TTATTACGGC 
GAAAAATTCA CAATAACTTT TGCGTGA
 
Protein sequence
MKFNNFSNIL NSLIEMERTN KCELFYFDES GFSQKSNLPY CWGPIGVQSL RPAHSHSKRL 
NVLGFLSRQG KLSFQTTEGR VTTDTVIDAF EHFINARKND KPCFIILDNA SFHRSAKFKQ 
KLHEWLMNDV LVCYLPPYSP ELNIIEILWK KVKYEWLPCE AFKTFEDLSI NIKNILNYYG 
EKFTITFA