Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0716 |
Symbol | |
ID | 6962083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 787886 |
End bp | 789220 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381991 |
Product | hypothetical protein |
Protein accession | YP_002265029 |
Protein GI | 209809491 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA CATTACGTAC ACGCTCTAAA AAAGTGTGGT TAGCTTCAAT GATCTCGCTA TTACTTTCAG GTCAAGCTTT GGCAGAAAGT CAATTGACGC AGCTTATCGA ACAAGCGTTG TCTTCAGATG CAAGTCGGGA GCAAATATAC GCGCAATCAC AAGCACTACG CTCCACTGGT ATTGCAAGTT CAACGCTTGC TGATCCTACT CTTAAAGTCG GATTTGGTGG GCTACCAGTA GACAGTTTTA AGTTTGATGA CGATCCAATG ACCAATATTT CTGTCGGATT AATGCAGAAG TTTGGGCGAG GCTCAAGTTT AGATTTACAA CAAAAGCAAA CTGGGCAGCA AGCGGATGTA TTGGCGATGC AAATTCAAGT TCGTGAACTC GATGTCGCAA ATACAATCAC CCAACTGTGG ATAGAGCTAG GCTTCTTACA AAAAGCAGAG GCGATTTTGC ATGAAAACCG TCAGCTATTG TCTGAAATGG AAAGATACAT TAATACCAAT TACGCCATTG GTAAAAGCGA AAGTCAGGAT CTTCTTCAAG CACAGCTTCA GCTAACTCGA CTCGATGAGA AGTTGCAAAC AAATCGTCAA TTACAAGGAC GAATTTATGC GCAGCTTAGC GAATGGCTAC CTAACTTAGC GGATCAAAAA TCAAAAGAAA TAACACCACT AGAGTGGTCT ACCTTAGAGC GACTATTAGC GAGAAAATTA CCTCAAGAAA CTGAATTTTA TGACTTATTA AATTCAAACC CAACCGTAAA AATGAGTGAA CTCACGATCA CAGCAACAAA AACAAGAGTA GATATTGCCA ATGAATCTTA CTCTCCTCAA TTTGGTGTCG AGGTCATGTA CGGTTACCGT CAAGCGAATG GAATGGGGGG ACAACCCGCC TCTGATTTAG TCAGCGCTTA TTTAACGATG GACATCCCTC TGTTTACCGA TAAACGTCAA GATCAAAATT ATGCGGCTGC ACAATATCAA GTGGGTTCTG CGAAATCACA ACGTGATGTG CTATTACGAC AATTGAACGC CAAAGTGAAT TCATTGTTGG TGGATAAAGT GAATTTTGAA CAACGTCTTT CTCGTTACAA CAATACGTTA TTACCTCAAG CAAAAGAAAG AACCAAAGCG GTAGAACGAG ATTATGAAAA TAATACGGCA CAATTTAATG ATGTGATTTC CGCAGCCAAT GATGAGCTGA GTATTGAGTT AGAGAAACAG CGTTTATTCA GTGATTTAAG TAAAACATAC AGTAACTTAG CTTTTTATTT AAATGGCTTT GATTATGCCG TATCTGCACC ACAAATAACC CCGTCTGAGC ATTAA
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Protein sequence | MKNTLRTRSK KVWLASMISL LLSGQALAES QLTQLIEQAL SSDASREQIY AQSQALRSTG IASSTLADPT LKVGFGGLPV DSFKFDDDPM TNISVGLMQK FGRGSSLDLQ QKQTGQQADV LAMQIQVREL DVANTITQLW IELGFLQKAE AILHENRQLL SEMERYINTN YAIGKSESQD LLQAQLQLTR LDEKLQTNRQ LQGRIYAQLS EWLPNLADQK SKEITPLEWS TLERLLARKL PQETEFYDLL NSNPTVKMSE LTITATKTRV DIANESYSPQ FGVEVMYGYR QANGMGGQPA SDLVSAYLTM DIPLFTDKRQ DQNYAAAQYQ VGSAKSQRDV LLRQLNAKVN SLLVDKVNFE QRLSRYNNTL LPQAKERTKA VERDYENNTA QFNDVISAAN DELSIELEKQ RLFSDLSKTY SNLAFYLNGF DYAVSAPQIT PSEH
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