| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0715 |
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| Symbol | |
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| ID | 6962446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 786406 |
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| End bp | 787875 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381990 |
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| Product | putative cation efflux system protein |
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| Protein accession | YP_002265028 |
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| Protein GI | 209809490 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAG TTAAAATAGC ATTACTTTCA GTTGTTATTG GCGGTGTTGT TGGTGCAGCG
AGCATGAATT TATACTCGGG ACATACAATG AGCGCAATGG CGATGACGGC TCAAGAAAAT
AGCGCATCAT CAAGCAGTGA TCCTTTGTAT TGGGTTGCTC CAATGGATGC CAATTATCGT
AGAGATCAGC CGGGTAAATC ACCAATGGGT ATGGATTTAG TGCCTGTTTA TGCCAACGAT
GCAAAAGGTG AGAAGTCACC AGCGGGTACC GTAACAATAG ATCCAAGCGT GGTGAACAAT
TTAGGCGTAA AAAGTGCTTT TGTTGAGAAA ACGATCCTGT CTCCAAATAT AGATACCGTG
GGTTATATCG CGTTTGATGA AAGTAAGTTG TGGCAAGTAA ACGTACGTGT AGCGGGCTGG
GTTGAAAAGC TAAATATCAA TGCCATAGGT GAAAAGGTAA ATAAGGGCGA TGTGTTATTT
ACTCTTTACT CTCCTGAATT GGTGAAAGCA CAAGAAGAAC TACTAAACGC GTATCGAACA
GGTCGAAAAG GACTGGTCAA AGGCGCAAGA GAACGGTTGC AGTCATTGGG TGTGGATAAA
ACTCAAGTTA ATTCTATTGT TAGAAACGGT AAATCAAATA AAAACATAGA GATAAAAGCC
ATTTCAAGCG GTGTCATTGC GAGTTTAAAT ATTCGAGAAG GTGGCTATTT ATCACCCTCT
CAAATCATTA TTAGTGCTGG ACCTTTAGAA AATGTGTGGG TAGATGCTGA AGTTTTTGAA
CGTCAGGCTC ACTGGTTATC TTCTGGTAAT AAAGCGGTGA TGACGTTAGA TGCGGTCCCT
GGGAAACGAT GGGAAGGTGA AGTGGATTAC GTTTATCCGA TTTTGGATCC AAAAACACGA
ACCATGCGCA TGCGTTTAAA ATTTGATAAC CAAGACGGTG CATTGAAACC AAATATGTTA
GCGAACATCA CCATTCACCC TAAAACAAAA GAAGAAGTAT TAACAATACC TCGCCAAGCG
GTCATTCGTT CAAATGGCAT GGCGCGGGTG GTATTGGATG AAGGTAATGG GAAATATCGC
TCAGCTCGAG TTATCGCTGG TCGCGAAGCA GGCAATAAAG TAGAAATAGT TAAGGGATTG
AAAGAAAACG ATAAAGTAGT CACGTCAGCT CAATTCTTAT TGGATTCTGA ATCAAGTAAG
ACGGCAGAAT TAAGTCGAAT TAATGGTCCT GAAAACAGTG TTTGGATTTC GGGCAATATT
ACTATGTTAA TGGCTGATTT TGGCATGGTT ACCTTTGATC ATAAAGCCGT CTCACAATGG
GATTGGAAAG CGGGTGAAAT GAATTTTTCG GTTGAGAAAG AGATTGATTT GGCTTCTTTT
CGTGAAGGTG AAGCAGTTCA GTTTTTAGTT CAAAAAGTGA ATGATGAATA TCAATTGATT
GAGATTGAAA AAGAAGGGGC GTTATTATGA
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| Protein sequence | MKPVKIALLS VVIGGVVGAA SMNLYSGHTM SAMAMTAQEN SASSSSDPLY WVAPMDANYR
RDQPGKSPMG MDLVPVYAND AKGEKSPAGT VTIDPSVVNN LGVKSAFVEK TILSPNIDTV
GYIAFDESKL WQVNVRVAGW VEKLNINAIG EKVNKGDVLF TLYSPELVKA QEELLNAYRT
GRKGLVKGAR ERLQSLGVDK TQVNSIVRNG KSNKNIEIKA ISSGVIASLN IREGGYLSPS
QIIISAGPLE NVWVDAEVFE RQAHWLSSGN KAVMTLDAVP GKRWEGEVDY VYPILDPKTR
TMRMRLKFDN QDGALKPNML ANITIHPKTK EEVLTIPRQA VIRSNGMARV VLDEGNGKYR
SARVIAGREA GNKVEIVKGL KENDKVVTSA QFLLDSESSK TAELSRINGP ENSVWISGNI
TMLMADFGMV TFDHKAVSQW DWKAGEMNFS VEKEIDLASF REGEAVQFLV QKVNDEYQLI
EIEKEGALL
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