Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0673 |
Symbol | gltS |
ID | 6962056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 737377 |
End bp | 738600 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381952 |
Product | sodium/glutamate symport carrier protein (glutamate permease) |
Protein accession | YP_002264990 |
Protein GI | 209809452 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.141822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAACA CTCTATCTAT CGGCGCACTA GAATCTTTTT TAATTGCCAT CGCCGTACTT TTTCTAGGCC ACCTAATCAA CTCTAAAGTT GTGTTTTTTA AGAAATACAA TATTCCAGAA CCCATTGTTG GCGGATTAAT CGTCGCTTTT GCTATTACCG CTTTGCATTT TCAAGGGATT AATCTTGAGT TTTCATTGCC GCTACAAAGT ACATTCATGT TGATGTTCTT CAGTACTGTC GGTTTAGCAG CGAACTATAC ACAACTGATA AAAGGCGGAA CAAAGGTATT CTTATTCCTT GCTGTTGCCT CTTTCTATAT CATTATTCAA AATGCAGTTG GTGTTAGTTT AGCAAGTGCT ATGGGCTTAA ATCCATTAAT GGGTCTTATT GCTGGTTCGA TCACTTTATC TGGTGGTCAT GGTACGGGTG CTGCTTGGTC CCAAACGTTT GCTGAAACTT ATCATCTAAA CACGCTAGAG CTAGCAATGG CATCTGCGAC CTTTGGTTTG GTTATGGGTG GCTTAATCGG TAGCCCGATT GCACAAAAAT TGATTCATAA ACATAAATTA GAATCAGAAT ATGGCACCGG TGTGGATACC CATACCCGCT TTCCTGAACT CGTCACTTAC AATGAACGAG AAGAAGAAAA AGTGACGGCA AAAAAAGTGA CCGAAACCTT ATTCATTCTA CTCATTTGTG TTGTAGGCGC TGGCCATTTA AGTGATTTTG TAGGCAGCTT TGATATTGCT TGGCTTAAAA TTCCTGATTT TGTTTACGCT TTATTTATTG GTGTTTTCAT CACTAATATT ACTGAGGTAA CAAAAATCCA TAAGATTGAT ACTGAAACTG TTGATATCTT AGGAACCGTT TCGTTGGCTC TGTTCTTAGC AATGGCATTA ATGAGTTTAA AATTGTGGAA CATCTTTGAT CTTGCGATTC CACTTCTTAT TATTTTATCG GTTCAAACCG TTGTTCTTGC TTTCTTCTCT TACTTTGTCA CTTTCAGAGT AATGGGGTCA AACTATGACG CCGCTGTTAT GGCTGGTGGC CATTGTGGCT TTGGATTAGG AGCAACACCA ACAGCAGTAA TGAATATGGG CTCTTTAGTG TCTCGCTTTG GTCCATCGCC ACAAGCCTTT ATGGTAGTTC CAATTGTTGG TGCTTTCTTT ATTGATATAG TGAACTTAAT TATTCTACAA ACTTACATTA GCTTTATTGG TTAA
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Protein sequence | MTNTLSIGAL ESFLIAIAVL FLGHLINSKV VFFKKYNIPE PIVGGLIVAF AITALHFQGI NLEFSLPLQS TFMLMFFSTV GLAANYTQLI KGGTKVFLFL AVASFYIIIQ NAVGVSLASA MGLNPLMGLI AGSITLSGGH GTGAAWSQTF AETYHLNTLE LAMASATFGL VMGGLIGSPI AQKLIHKHKL ESEYGTGVDT HTRFPELVTY NEREEEKVTA KKVTETLFIL LICVVGAGHL SDFVGSFDIA WLKIPDFVYA LFIGVFITNI TEVTKIHKID TETVDILGTV SLALFLAMAL MSLKLWNIFD LAIPLLIILS VQTVVLAFFS YFVTFRVMGS NYDAAVMAGG HCGFGLGATP TAVMNMGSLV SRFGPSPQAF MVVPIVGAFF IDIVNLIILQ TYISFIG
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