| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0578 |
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| Symbol | treA |
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| ID | 6962612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 632600 |
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| End bp | 634270 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381865 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_002264903 |
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| Protein GI | 209809365 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA CAGAGTGGTG GCGCACAGCG ACCGTTTATC AAATTTACCC AAAAAGCTTT
TGTGATAGTA CCGATAAAGG TACCGGAGAT ATCCAAGGGA TCATTTCAAA ACTGGATTAT
TTACAAAAAC TGGGAATTGA TGCGATATGG TTGACACCTG TCTATCAATC GCCAATGGTT
GATAATGGCT ATGATATTTC AGATTATTAT TCCATTAATA CTGATTTTGG AACGATGGAT
GATCTGGATG AATTGCTTGA ACAAGCAACG TCTCGTGGTA TACGTATTAT TATGGATATC
GTTGTTAATC ATACATCGAC AACGCATCAT TGGTTTCAAT CGGCATTGGG AAATAAAGAC
AGCGAATATC GAGATTATTA TATTTGGAAA GATCCCGTTG ATGATAAAGA ACCAACGAAT
TGGCAGTCTA AATTTGGGGG TAATGCGTGG GCGTTAGATG AGTCCTCTGG ACAGTATTAT
TTGCATCTTT TTGCTAAAGA ACAAGCGGAT TTAAATTGGG AGAATCCAAA GGTTCGTCAA
GAAGTGAAAA ATATTATTAG CTTTTGGGCA GAAAAAGGCA TTGATGGATT CCGTTTAGAT
GTCATTAATT TGATTTCAAA ACAACAAGAA TTTCTGAATG ACGATGTGGG AGATGGCCGC
CGATTTTATA CTGATGGCCC TAAGGTACAT CAATATTTAC AAGAGATAAG TGACGCTGTT
TTTCAAAAGT ATGGTTCTGT TACGGTTGGT GAAATGTCAT CGACCACATT AGAGCATTGC
CAACAATATT CAGCGAAAGA AGGCAAAGAG CTGTCGATGG TGTTTAACTT CCATCATCTT
AAAGCCGATT ATAAAAATGG CGATAAATGG ACGAAATTCC CATTTGATTT CTTATCATTG
AAATCCATCT TTAATCATTG GCAAACAGGT TTGAATGGTA AAGGCTGGGG CGCATTGTTC
TGGTGTAATC ACGACCAACC AAGAGTGGTT AGCCGTTTAG GTCACGATGG TGAGTATCGT
GAATTATCAG CCAAGATGCT TGCTTCCTCA ATACACATGA TGCAAGGAAC ACCGTATATA
TATCAAGGTG AAGAGATTGG GATGACCAAC CCACACTACA CTTCTATTGA TGAATATCGT
GATCTTGAAA GTACCAATAT GTACAACATC ATGGTGAACC AAGATAAGTC AGTTTCAGAC
GATGAGATGC TTGAGATTTT AGACCAGAAA TCACGAGATA ATTCCCGTAC CCCAATGCAA
TGGAATGATT TGGAAAATGC TGGGTTTACT CAAGGAAAAC CGTGGTTGTC GATTGCGACT
AACTATAAGA GTGTAAATGC AGAAAAAGCA GTCAGTGATT CAAGCTCCGT GTTTTACTTT
TATCAGAAAT TGATTCAGTT GCGTAAGCGT ATTGATGTCA TTACTACTGG GGATTATCGC
GATCTTATGC CTGAGCATGA ATCTCTATTT TGTTACCAAC GTGAAAATAC GACGCATCGT
TTGATTGCGG TACATAATTT TTACGGTAAT GACGTTCCTA TTACTTTAGA TTTAACAGGG
AAGCAATCGG AATACATTTT AGCGAACTAC GGTGATGTCG AATCTACACC ACCGCAAGAG
GGTGGAATAC TGCGTCCGTA TGAATGCCGC GTTGTATTAA TCCAAAAGTA A
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| Protein sequence | MTNTEWWRTA TVYQIYPKSF CDSTDKGTGD IQGIISKLDY LQKLGIDAIW LTPVYQSPMV
DNGYDISDYY SINTDFGTMD DLDELLEQAT SRGIRIIMDI VVNHTSTTHH WFQSALGNKD
SEYRDYYIWK DPVDDKEPTN WQSKFGGNAW ALDESSGQYY LHLFAKEQAD LNWENPKVRQ
EVKNIISFWA EKGIDGFRLD VINLISKQQE FLNDDVGDGR RFYTDGPKVH QYLQEISDAV
FQKYGSVTVG EMSSTTLEHC QQYSAKEGKE LSMVFNFHHL KADYKNGDKW TKFPFDFLSL
KSIFNHWQTG LNGKGWGALF WCNHDQPRVV SRLGHDGEYR ELSAKMLASS IHMMQGTPYI
YQGEEIGMTN PHYTSIDEYR DLESTNMYNI MVNQDKSVSD DEMLEILDQK SRDNSRTPMQ
WNDLENAGFT QGKPWLSIAT NYKSVNAEKA VSDSSSVFYF YQKLIQLRKR IDVITTGDYR
DLMPEHESLF CYQRENTTHR LIAVHNFYGN DVPITLDLTG KQSEYILANY GDVESTPPQE
GGILRPYECR VVLIQK
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