Gene VSAL_II0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0560 
Symbol 
ID6961963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp614957 
End bp615361 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content35% 
IMG OID643381848 
Producthypothetical protein, putative phage gene 
Protein accessionYP_002264886 
Protein GI209809348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00595244 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAT TACGAAAACT GGAAGGTGAG CAAGATTGGC TAGATGTGGA TGGAGTTAAG 
ATTTATACCA TTTCAGCAAA TGAAGAACCA ATCAATATGG TCGCTTTTCA TCAACGACTA
ACAGAGGTTA AATCTGAAAT AACTCTCGAA TGGGATCAAA CGGCTGCGTT CGTTATTTTT
CATAATGGTG CAAGTTGTAA GTATTTGGTT TTAGCTTGTT GGGGTAATGA TAATGAATTA
TTTACATCAG TATCAGTTCA AGTTAATGGG GTTTGGGTTG TAGATCCAAC TAAATATTCG
TTTTGTCTTT ATGATATTGA AGTCATGTGG AAGGAACGTA ATATCTACAT AGAAACAATA
GATTGTGAAA GTCCGTCATT GGTTAAGTAT CGCACTAGCC GTTAG
 
Protein sequence
MYKLRKLEGE QDWLDVDGVK IYTISANEEP INMVAFHQRL TEVKSEITLE WDQTAAFVIF 
HNGASCKYLV LACWGNDNEL FTSVSVQVNG VWVVDPTKYS FCLYDIEVMW KERNIYIETI
DCESPSLVKY RTSR