Gene VSAL_II0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0522 
Symbol 
ID6962600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp582242 
End bp583948 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content41% 
IMG OID643381812 
Producthypothetical protein 
Protein accessionYP_002264850 
Protein GI209809312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAATTT TGATGAGTAT AAAACAAGTC ACCCTATCTT CCATGATGAA GGCTTCTACA 
ATGCGCTTTT CTATTATTAA TACGTCTCTA ATAAAAAAAG TCGTCTTATT TGCAGTGCTG
TGTGTAAGTG GCATCTCGTT AAGTTACGCT CAAGCGACAG CAACCGTGAG CAAAAACCAA
ATTACTGAAA ACGAAGTGAT TCAGTTAATG GTGTCAGTCG ATAAAAGTGC CGATCAAAGT
AAGTTTGATA CAAGCCAGCT TGGTAACGAC TTCCGCTCAG GCCAAGTGAG CTTTGGTAGC
TCACGATCAC TCGTCAATGG CGATTACAGT GTACAAAGTC AATGGACGGT CTCTATTGCT
CCAACAAGAA TGGGCACGCT AACCATTCCT AGTTTGAACG TTGGCGGTGA GAAAACCAAT
CCAATCACAA TTCGAGTCAA CAAAGACGCC ACTGCACCAA AAAGCAGTGA TGTGATTAAA
GTCAGTGGTG AATTAACCAA GTCAGAATTA TACGAAGGTG AAACGGCACA ATTTCATGCC
AAAATTGCCA TCTTTGCTGA TACACGTCGT TTAAAAGATC CCAACATCAT AACCCCACAA
GGCAATGGCG TTGAGTTTTC CCCTGTTGGT GAAAGTAAAC AATACCAAAC CGTGATTGAT
GGATTGCAAG CCACCGTCGT TGAACAGACT TTCAATGTCA GCGCAGATAA AGTAGGTGAA
CTGCATTTTT CAGGCTTGGC TTTTACTGGC GGCCTGATCC AAACGGATCG TTATGGACGT
AGCACTAAAC TGATCCCATT AAACATCTCA CCAGAGAATT ATCAATTAAC CGTATTAGCA
AAACCTGCCG ACTTTAAAGG CACTTGGTTA CCAACCTCTA GCTTAAAACT AGGTCAACAA
TGGCTAATTG ATGGAAAACC AATGACATCG ACAACCATTG AGGCCGGCAC TGCTATCACT
CGTCAGATAA TTCTGAACAT GGCTGATGTT CCGCCAGAAA AATTACCAAC ACTGTCCATT
GAGTACCCTA AATCGGTTCG TATGTACGAT GAAAAGCCAG TGATAGGCAC AGACAGTGAA
GGAAACAGTG TGATGACAAT TAAACAAGTT ATCATTCCAC ACAAAGCGGG AAGCGTGACA
TTACCGGCAG TTTCCGTTCA ATGGTGGAAC AGTAAGACAC GACAATCAGA GACCGCAACC
CTTGAATCAT TGCAGTTAAT TATCACACCA AGCACTCAAA CTGATGAGCA AAAGATCCAG
CAGCAAACAT ATGCGCAGCC TGTTGACGTA GAAAAACGTG ATGAAGCTCA AGGTTTTTGG
CCTTATACCA CCGTTCTGTT CGCTTTATTA TGGTTGATAA CGCTTCTTGC ATGGTACATC
CACCATACAA AAGTTCAGTC TTCTAAAAAA GAAGAAAAGC ACACAGTAGG TACAAGTACT
ATTGACACAA AAGCACTCAT TCGTGCAGTA AGTGATAACA ACAGTATATT AGCGCATCAA
ATTTTAACGG ATCTAGCCCC TTTACTTTTA GAACAAAGCA TTGATGTAAG TGCAATTAAA
ATGTGCATCA CTGCACTTAG CCAGCAACAA TACTCAAAAG AAAACAATAA GTTAAGCTCA
ACAAAATACA TAATCACTGA GATTAATGCT TTATTGAATA AGAAAAGTAT CGCAAGTTCA
AAAGGGGTCA CCTTAGAACA ACTATAG
 
Protein sequence
MVILMSIKQV TLSSMMKAST MRFSIINTSL IKKVVLFAVL CVSGISLSYA QATATVSKNQ 
ITENEVIQLM VSVDKSADQS KFDTSQLGND FRSGQVSFGS SRSLVNGDYS VQSQWTVSIA
PTRMGTLTIP SLNVGGEKTN PITIRVNKDA TAPKSSDVIK VSGELTKSEL YEGETAQFHA
KIAIFADTRR LKDPNIITPQ GNGVEFSPVG ESKQYQTVID GLQATVVEQT FNVSADKVGE
LHFSGLAFTG GLIQTDRYGR STKLIPLNIS PENYQLTVLA KPADFKGTWL PTSSLKLGQQ
WLIDGKPMTS TTIEAGTAIT RQIILNMADV PPEKLPTLSI EYPKSVRMYD EKPVIGTDSE
GNSVMTIKQV IIPHKAGSVT LPAVSVQWWN SKTRQSETAT LESLQLIITP STQTDEQKIQ
QQTYAQPVDV EKRDEAQGFW PYTTVLFALL WLITLLAWYI HHTKVQSSKK EEKHTVGTST
IDTKALIRAV SDNNSILAHQ ILTDLAPLLL EQSIDVSAIK MCITALSQQQ YSKENNKLSS
TKYIITEINA LLNKKSIASS KGVTLEQL