| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0486 |
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| Symbol | thiD |
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| ID | 6962420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 545136 |
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| End bp | 545990 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643381779 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_002264817 |
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| Protein GI | 209809279 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCGT TACACACTAC CGCACTTTTA TCGACATTAT CTTCTACCAC ACCGATTGTA
TTAACCATTG CTGGCTCTGA CAGTGGCGGC GGTGCAGGCA TCCAAGCCGA CATTAAAGCA
ATTTCTGCAA CCGGCAGTTA TGCGTGTTCT GTTATTACCG CATTAACGGC TCAAAATACG
CAAGGCGTTA CGGGCATTTA TCCAATCAGC AGTGAATTTG TTGAGCAGCA ACTTGATGCT
GTTTTCTCTG ATTTGAATGT TATCGCCGTT AAAGTCGGCA TGTTAAGTGA TTCTGATATT
ATCCGCTCTG TTGCGAAAAA AATAAAACAA TACTCTCCTC GCTATCTTGT GGTTGACCCT
GTTATGGTCG CGACCAGCGG TGATCTTCTT CTGCAAGCAT CAGCTATTGA TAGCCTTAAA
TCTGAACTGC TTCCCCTTGC CGATGTTATC ACGCCAAACC TTCCTGAAGC GGCGGCACTC
ATTAATGCTA AAGTTCCCGA AAGTGAAGCT GAAATGACGG CAATGATTGA TGAACTTCGT
CAATTAGGTG CTAAATCAGT CTTACTGAAA GGCGGGCATT TAGAAAAGGA TGAAAACAGT
ACCGATTTAC TGATTTTATC TGATTCCATA GAACGCTTAT CGACACCTCG AATTGAAACT
CGCAATACAC ACGGCACGGG CTGTACGTTA TCGTCAGCGA TTGCTTCGTA TTTAGCGCAA
GGTCATGAAT TACTGGCTGC GGTAGCATTA GGTAAGCAAT ACATTACTCA AGCCATTATC
CATGCCGATG AACTGAATAT TGGTCAGGGA CATGGGCCTG TGAATCACTT TTTTGCTTTA
CATACTCCAG AGTAA
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| Protein sequence | MPSLHTTALL STLSSTTPIV LTIAGSDSGG GAGIQADIKA ISATGSYACS VITALTAQNT
QGVTGIYPIS SEFVEQQLDA VFSDLNVIAV KVGMLSDSDI IRSVAKKIKQ YSPRYLVVDP
VMVATSGDLL LQASAIDSLK SELLPLADVI TPNLPEAAAL INAKVPESEA EMTAMIDELR
QLGAKSVLLK GGHLEKDENS TDLLILSDSI ERLSTPRIET RNTHGTGCTL SSAIASYLAQ
GHELLAAVAL GKQYITQAII HADELNIGQG HGPVNHFFAL HTPE
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