| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0446 |
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| Symbol | |
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| ID | 6961877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 505988 |
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| End bp | 506782 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381739 |
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| Product | binding-protein-dependent transport system inner membrane component |
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| Protein accession | YP_002264779 |
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| Protein GI | 209809241 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.286473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAACT TTATCAACAT ATTGCAGCCC GTATTTTCCG CTTTACTCCA AATCGCCTTT
ATTACTCTTG GATTATTCTG GGTATTAAAT AGCGGAGCTG AAGCCATGAA TTATCAGTGG
CAATGGGACC GAGTACCTGA TTTCCTCTTT TTTTACGAAG ACGGTGAATG GTTTCCAGCT
GAATTAATCG AAGGCTTATT GGTTACGTTA CAAATCTCAG GGTTAAGCGC AATAGCAACC
TTCCTGATTG CCCTTATTAC GGCCTTACTA CGCTTATCTG ATTCTGTCGT TGGCCGTTCA
TTGGCCAAAG GTTATATTGA GTTAATTCGA AATACGCCCT TATTGGTGCA AATCTATTTA
CTTTATTTTG TATTTGGCCC TTATTTAGGA TTAGAACGAT TCTCTACGGC TATCCTTGCT
TTGGCTCTAT TTCAAGGGGC TTATACCGCA GAGATTTTAC GCTCTGGTTT GGTCAATTTA
CCTAAAGGGC AATTTGAAGC CTGCCGCTCA CTTGGTTTAT CTTCTTTTAA TAGCTATCGA
TACATTATTC TTCCTCAAGT GATTCAAAAA ACCTTACCTT CACTCACTAA TGAATTAGTT
TCTTTAGTAA AAAACTCTTC TATAGTCAGT GTGATGGCAA TTTTTGATTT AACAACGGAA
GGACGAAACA TTGTCGCAGA TACCGCAATG CCATTCGAAA TTTGGTTCAG TGTCGCCGCT
ATCTATTTAT TAGTTACACT CAGTCTCTCT GGGCTATCGG CCTGGTTAGA GCATAAAATG
CATAATTCAC ATTAA
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| Protein sequence | MRNFINILQP VFSALLQIAF ITLGLFWVLN SGAEAMNYQW QWDRVPDFLF FYEDGEWFPA
ELIEGLLVTL QISGLSAIAT FLIALITALL RLSDSVVGRS LAKGYIELIR NTPLLVQIYL
LYFVFGPYLG LERFSTAILA LALFQGAYTA EILRSGLVNL PKGQFEACRS LGLSSFNSYR
YIILPQVIQK TLPSLTNELV SLVKNSSIVS VMAIFDLTTE GRNIVADTAM PFEIWFSVAA
IYLLVTLSLS GLSAWLEHKM HNSH
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