Gene VSAL_II0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0409 
Symbol 
ID6962566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp460285 
End bp460692 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content38% 
IMG OID643381704 
Producthypothetical protein 
Protein accessionYP_002264746 
Protein GI209809208 
COG category[S] Function unknown 
COG ID[COG2501] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000857637 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATC AAGAAGAATT TGAAGTAGAA GCGATTGGTG TTGAAGTTAA CATGCAACCA 
ATTGAACTAT ACAAAGTATT AAAAATTGCC AATGTTGTAA ATGGCGGCGG TGAAGCTAAA
CACATGATTG GTGAAGGCTA TGTGGGTGTT AATGGCGAAT TAGAACAACG TAAACGTCGT
AAAATGTACG ATGGTGATGT AATTGAATTC AATGAAGAAT ATTACGTTGT GATCTGTGAT
ACGCCAGTTG GCGAGCTTCC AGAAATCATA GAAAAACCAG AACCAATGGT TATCCAACCA
GCGCCTTCTG AGCCAAAACC TAAAAAAGAA AAAAAGAAAA AACAGAAGCC AGAGATCCCA
ACAACGATTG ACCCAAACAG TGGTCGTAAA TCGATAAACT TCTTCTAA
 
Protein sequence
MSDQEEFEVE AIGVEVNMQP IELYKVLKIA NVVNGGGEAK HMIGEGYVGV NGELEQRKRR 
KMYDGDVIEF NEEYYVVICD TPVGELPEII EKPEPMVIQP APSEPKPKKE KKKKQKPEIP
TTIDPNSGRK SINFF