Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0361 |
Symbol | |
ID | 6961815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 405171 |
End bp | 406313 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643381658 |
Product | putative ABC transporter solute-binding protein |
Protein accession | YP_002264700 |
Protein GI | 209809162 |
COG category | [R] General function prediction only |
COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.083844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT GGTTGTTATT GCTCAATAGC TTAATCTTTT CTTTTGGTGT GAATGCGACA GATACATGGA AAGAAGTAGA ACAAAAAGCC AAAGGACAAA CGGTATACTT TCATGCTTGG GGAGGAAGCC AAGAAATAAA TAACTACCTT CGTTGGGCAG ATAAAGAGTT GCAACGTGAT TACGGAGTGA CACTAAAACA CGTTAAAGTT GCCGATATTG CAGAAAGTAC GTCTCGTCTT ATTGCCGAAA AAACCGTAGG TAAAAATGAA GGTGGCAGTG TTGATATGGT ATGGATTAAT GGTGAAAACT TTAAATCTAT GAAAAACAGT CAATTGCTTT TTGGTCCATT TGTTGATCGT TTACCAAGTT GGAAATACGT AGATAAATCG TTGCCAATAG ACAGTGATTT TTCTGAGCCA ACATTAGGAT TAGAAGCGCC ATGGGGGGTT GGTCAATTAG TTTTTATTCA CGATAAAGCG ACATTAAATA ACCCGCCACA GTCTTTTTCT GAATTATTAA GTTACAGTAA GGCATTTCCT AATCGAATTA CTTATCCTAA ACCTCCTGAA TTTCATGGCA CGAGCTTTTT AAAAGCACTG CTAATTGAAT TGACCAATAA TAATCCTCAA TTAATGAAAC CAGTGGAAAA TGCTAATTTT GCCGAGGTAA CAAAACCGCT ATGGGCATAT CTTGATGAAT TACATCAAAC GGCATGGCGT AAAGGAAAGC AATTTCCATC AGGCAGCGCA CAGTCAATTC AACTGCTTGA TGATGGGCAG ATAGATCTCG CGATCACATT CAATCTAAAT GAAGTCTTTT CAGCTCAAGC TAATGGTAAA TTAGTCGAAA CAACAGAAGC TTATGCAATG GAAGCGGGGG CATTGTCTAA TATTCATTTC CTAGCAATAC CATGGAATGC ATCCGCAAAA GAGGGAGCGC AAGTGGCGAT TAACTTTTTA CTAAGCCCTA AAGCACAATC TCGTAAAGGT GATTTAAGTA TTTGGGGAGA TCCATCAGTA TTAGAATCTC AGTATTTAAT GGGGTCAGCA AAAAATACGA CGTTATTTAA ATCATTAGCT GAGCCACACC CAAGCTGGCA AGTGGCGTTA GAAAAAGAAT GGTTAGTACG TTACGGTAAT TGA
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Protein sequence | MKKWLLLLNS LIFSFGVNAT DTWKEVEQKA KGQTVYFHAW GGSQEINNYL RWADKELQRD YGVTLKHVKV ADIAESTSRL IAEKTVGKNE GGSVDMVWIN GENFKSMKNS QLLFGPFVDR LPSWKYVDKS LPIDSDFSEP TLGLEAPWGV GQLVFIHDKA TLNNPPQSFS ELLSYSKAFP NRITYPKPPE FHGTSFLKAL LIELTNNNPQ LMKPVENANF AEVTKPLWAY LDELHQTAWR KGKQFPSGSA QSIQLLDDGQ IDLAITFNLN EVFSAQANGK LVETTEAYAM EAGALSNIHF LAIPWNASAK EGAQVAINFL LSPKAQSRKG DLSIWGDPSV LESQYLMGSA KNTTLFKSLA EPHPSWQVAL EKEWLVRYGN
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