| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0316 |
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| Symbol | |
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| ID | 6961772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 355466 |
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| End bp | 358141 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643381617 |
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| Product | response regulator, histidine kinase |
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| Protein accession | YP_002264659 |
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| Protein GI | 209809121 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.304506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTGA TGAACCGTAT CTCTGTGAAA TCCAGAATGC TCACTCTAGT TTTTCTCCCA
TTGCTTGTGC TTTGTGTATT ATCAGGGATA GAGATCAGAT CACAGATGAT GAAGTTGAAT
ACATTAAATA CACTGAATCA TGCCCTCCAA TTTAATCATA CCTTAGCAGG ATACATCACA
ACGATGCATC AGCAACGTTT GAACATACTT TATGGTCTCG ATAATGGAAC AGAATATGAA
ACATCAAAAA AAGCGTTAGC CCAACTTGTC GTACAATCAA AAAAACAAGG AACACAATCT
CTTTCCGATA CCTTATCGGA ACTCCAACAA GCAAATACTG AGATTACCCA GTTTTCATCA
AACACCATAG AAGAATGGTC AAGTTGGATC ACAGATGTAG TACAACAAAC GTATCAATTA
AAAAATGCAA ATACGCTCAA TGCAGCATCA GATATCATTA ACCAAAAAAC GACTACCCTT
ACCCAACTTC AATGGGTTAA TTATTGGGCA ACTCAAGAGA ATTGGTACAT TCACCTGATG
TTGATAACAC CACAAACAAG CTATCAAGAT GCTCTAAATT CACTTTCTCA GCGTCAGCAA
TTGTATATTG AACAGTTTTT AACAATGAAC GCGAGTCAAT CGGATATTAC TCTTTTATTA
ACAACCTTTA GTAATATCAA TTTCTCATCA AGCAACACTT TTAGAAATGC AGTCATTGAG
AACAAATCCG AAAAATACAC AGCGAAAGAC ATCAATACCG GGACACAAGC ACTAAACCAA
CGACTCCAAC TCATTCAAGC AGCTACAACG ATTATCACGA ATGAATTAAA GAACGATATT
GAAACAAAAA TACGAAGTAT TAATAATATG ATTGTTTTAT TCATATCGAT ATTAATCACA
TCTTTAGTCT TCATTTCATA CTTAGGTATT ACTCTATCCG CTAGGATCCT AAGCTATTTA
AAAATGACGA TTTCCTCTAT GGCGTTAATA GAAAAAAATC ATGATTATTC CATCCAGATT
AAGAGTGATG GCAATGATGA GTTCACCTTG TTTTCTAAAA ATTTGAATGC TCTCATATCA
GAAAGAGCCA TGAATGAGGA TAAAATCGTA GGAGCTAAAG AAGAAGCAGA ACAAGCCAAC
TTAGCCAAAA GTACCTTTCT TGCCAATATG TCTCATGAAA TAAGAACGCC TTTAAATGGT
ATTATTGGCA TGTCCGGCAT TCTTTCTGAA ACCAAATTGA CACCAATTCA ACACGATTAT
TTAAATACGA TTGAAACGTC TTCTCAAACG TTATTAATTT TGATTAATGA CATCTTAGAC
ATATCAAAAA TTGAATCAGG TAATTTGTCG TTGCATCCTC ATAGTACTGA TTTACGTGAA
ATAATTTTCG ATACCGTGTC TATCATCATT TCGAAAGCCA ATGAAAAACA CCTTAATTTG
ATCATTAATA TACCACCCGA TTTGCCGTCA TCTTTATTAC TTGATGACCA CAGATTAAGA
CAAATACTAA TGAATTTAGC GTCAAATGCG GTCAAATTCA CCCCTAAAGG TCACGTTCAA
CTTGACGTCG AGTTTACCAA AAAAGAAAAC AATACCGTCG AACTTACTAT TTCAGTGTCT
GATTCTGGTG TAGGTATTGA ACAAAACAAG CTCAATTCAA TTTTTGAACC CTTTGTACAA
GAAGACAGCT CAATCACTCG ACAATTTGGC GGTACAGGGC TGGGACTTGC CATCAGTAAG
CAATTAGTTG ATTTGATGGA TGGCGAATTT ACGGTTAAAT CCACAAAAGG AGAAGGAAGT
ACATTTTCTT TCTCATTAAT AACCGAAGTA CTAGAACACA ACGTTATCCA ATACCCAGAA
TTAGAGGCCA TTACTTTCCA TGTTATCGCC AATAAAACCG CTTATGCACA AGATATTATT
ACAGAGCTTA GTTATTACAA TATACACAAC GTTGTTGTTT ATGCTTCAGC GAAAGAGTTA
GAGCTAACCG CAACCAGTGC TGACGTCATT ATTTACTGCG CAGGCCACTG TAATGATTCT
GATTGTAAGT GCAAGGGCCG CTTACGTTGC GTTCGTAAAA ATCACCCTGA CACTCCAATT
GTATTAGCTC AACAACACAA AGACAGAGCC GCCAATTTCG AAGCTATCAT AAATGGCCTA
ATTACCTACC CTTTACTTGG CTATCGATTA ATGAAAACGT TAACCAATGC GTTAACCGAT
AGTTCAACGA ACGATGACTT AACTAACACG GTACCTTTGA GCCAAGACAA CGAAATTAAC
AACAATTCAC CCAAGAAAAA AGGGGCTAAC CATATTCTGA TTGTTGAAGA TAACTTAGTT
AACCAAAAAG TCGCTTCTCT CTTTTTAAGT CGATCTGGTT ATACGTTTGA AATTGCAAAT
AACGGCCAAG AAGCGATTGA AAAATTTACC GAAAGCGAAG CGTATAATGT TATTTTAATG
GATTGCATGA TGCCCGTAAA AGATGGTTTC TCAGCAACGA AAGAGATACG ACTCTTAGAA
AAAGCTCAGA ATAGAAAGAA AATACCCATT ATTGCGTTAA CCGCCAGTGT ATTAGATCAA
GACATCACAA AATGCTACGA ATCTGGTATG GATGCATACG TAGCAAAACC CTTCAAGAAA
GAAGTACTAC TCAATCAAAT AATGAAAATG AAGTAG
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| Protein sequence | MMLMNRISVK SRMLTLVFLP LLVLCVLSGI EIRSQMMKLN TLNTLNHALQ FNHTLAGYIT
TMHQQRLNIL YGLDNGTEYE TSKKALAQLV VQSKKQGTQS LSDTLSELQQ ANTEITQFSS
NTIEEWSSWI TDVVQQTYQL KNANTLNAAS DIINQKTTTL TQLQWVNYWA TQENWYIHLM
LITPQTSYQD ALNSLSQRQQ LYIEQFLTMN ASQSDITLLL TTFSNINFSS SNTFRNAVIE
NKSEKYTAKD INTGTQALNQ RLQLIQAATT IITNELKNDI ETKIRSINNM IVLFISILIT
SLVFISYLGI TLSARILSYL KMTISSMALI EKNHDYSIQI KSDGNDEFTL FSKNLNALIS
ERAMNEDKIV GAKEEAEQAN LAKSTFLANM SHEIRTPLNG IIGMSGILSE TKLTPIQHDY
LNTIETSSQT LLILINDILD ISKIESGNLS LHPHSTDLRE IIFDTVSIII SKANEKHLNL
IINIPPDLPS SLLLDDHRLR QILMNLASNA VKFTPKGHVQ LDVEFTKKEN NTVELTISVS
DSGVGIEQNK LNSIFEPFVQ EDSSITRQFG GTGLGLAISK QLVDLMDGEF TVKSTKGEGS
TFSFSLITEV LEHNVIQYPE LEAITFHVIA NKTAYAQDII TELSYYNIHN VVVYASAKEL
ELTATSADVI IYCAGHCNDS DCKCKGRLRC VRKNHPDTPI VLAQQHKDRA ANFEAIINGL
ITYPLLGYRL MKTLTNALTD SSTNDDLTNT VPLSQDNEIN NNSPKKKGAN HILIVEDNLV
NQKVASLFLS RSGYTFEIAN NGQEAIEKFT ESEAYNVILM DCMMPVKDGF SATKEIRLLE
KAQNRKKIPI IALTASVLDQ DITKCYESGM DAYVAKPFKK EVLLNQIMKM K
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