Gene VSAL_II0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0304 
Symbol 
ID6961761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp338736 
End bp340016 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content40% 
IMG OID643381605 
Productputative glycosyl transferase 
Protein accessionYP_002264647 
Protein GI209809109 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACCA AATCAAAAAC AACATTATTG TTTGTGCATT ATGGCGATGA TTGGATCAGA 
GGCAGTGAAA TCTGCTTGAT TAATCTCATC AAAAGCATTA ATCATCAAAA ATTTGAGTGC
ATCCTTTGGT GTAACCAACA GCGCCTTGCC GATGAAGTAA ACAAGCAAGT CAGCGCCGTT
TATGTCACCC CCTTCACTTT ATTATTAGGG TGGAAAGCAC CTAAATTCTC ATTATCTAAT
TGGTATCAGC TATACCAACA AGGTAAAGAG ATTGTGGATA CTCATCAGGT TGACTTAATT
CACTGTAACA GTGCCGCACC ATGTCAGTGG ATGAACCCAG TGGCACGCCA CACTCATACG
CCTTTAATTA CTCACTTACA CACCCAATAC CCACTTCGTG ACCGCTTAAC CTTAGGCATT
CATTTTAGCC CTAGCCTTAT TACGGTAAGT AACGCGATAG GTGAAGAATT GCTTCATGAT
GGATACAACC GAAAAAACCT AACCGTTATC CCTAATAGTA TTGATACTAC AAAATTAAAT
GCTCAACGCA CGACCCCATT ACGTCAACAA CTGGGAATAG ACAGTAGCGC CTTTGTTTTG
GCAACATCAG GATCATTAAT TCATAGAAAA GGCGTTGATC TAATTATTGA TAGCTTGCAT
AAATTGGATG CTGTCATGCT TAACATTCAT TTGATTGTTA TCGGCGAAGG AGAAGAACGA
GCACAATTAG AGCAACAAGC AAACCACCTT CAACTCCATA ATAACATTCA TTTTTTAGGC
GAACGAGACA ACGTTGTTGG TCTTCTAAAA AGTGGCATGA ATGCTTATAT TAGTGGCGCA
AGAGACGAAG CATTTGGCCT TGCTCTTATT GAAGCCTCTT TAGCCAAGTT ACCGGTCATT
GCTCCAATGG TTGGAGGCAT TCCAGAAGTG ATTTCCCATT ATGAAACCGG GTTTCTCACT
CAACCAAACG ACAGTGAATC ATTTGCAAAA GCGATCATGG TTTTTATTCA AAACCCACGT
TTAACAAAAG AGATGGGAGT CAAAGGAAAA GAAATTGTAT ATCGAAACTT CACTTTGCCT
GAATACGCAA AACAATTTGA AAAACACTAC GAACAACAAC TAAACACCTC AAATGAAGAG
ACTTATTCTC GACCATTATG GGCCGCAATT ACGCCTATTT TCAGTCGTCT TCGTTATATG
TCCACGCTGT TTTTTCATCA TCATATTGTC TCTAGCTTCG GTGTAAATGA AACCCTAAGT
AAGGAGACTC ATCATGAATA A
 
Protein sequence
MSTKSKTTLL FVHYGDDWIR GSEICLINLI KSINHQKFEC ILWCNQQRLA DEVNKQVSAV 
YVTPFTLLLG WKAPKFSLSN WYQLYQQGKE IVDTHQVDLI HCNSAAPCQW MNPVARHTHT
PLITHLHTQY PLRDRLTLGI HFSPSLITVS NAIGEELLHD GYNRKNLTVI PNSIDTTKLN
AQRTTPLRQQ LGIDSSAFVL ATSGSLIHRK GVDLIIDSLH KLDAVMLNIH LIVIGEGEER
AQLEQQANHL QLHNNIHFLG ERDNVVGLLK SGMNAYISGA RDEAFGLALI EASLAKLPVI
APMVGGIPEV ISHYETGFLT QPNDSESFAK AIMVFIQNPR LTKEMGVKGK EIVYRNFTLP
EYAKQFEKHY EQQLNTSNEE TYSRPLWAAI TPIFSRLRYM STLFFHHHIV SSFGVNETLS
KETHHE