Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0253 |
Symbol | |
ID | 6961717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 280345 |
End bp | 281604 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643381560 |
Product | putative 3-hydroxy-3-methylglutaryl coenzyme a reductase |
Protein accession | YP_002264602 |
Protein GI | 209809064 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1257] Hydroxymethylglutaryl-CoA reductase |
TIGRFAM ID | [TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0262386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAAT TGAATCTGCA CCGCCGTGAT TATGTCTCTA TCTTAGGGGG GGATATCTCT GCAGATGAAT TAGAGCAAAT GCTCAATCCT CACTTTGATA AACCGACAAA TAAACTGACA CCAAGCCCTT ACTTAACCGA TAAAAACATT ACTCGTCGTT GGGATAAATT GGCTAATCCT GCGTTGCAAG CTGAGTTGCT TGATGTGCAT ACTCAAGCAC AATCACATGT TTATGAAAAA AACATCGAAC ACTTCATTGG CACAGTAAAA ATTCCTGTCG GACTTGCTGG ACCTTTGCGT GTGAATGGCC TATTTGCCAA AGGCGATTAT TTGGTTCCAT TAGCGACCAC AGAAGCCGCC TTAGTAGCCT CTTATAACCG TGGAGCACAA CTCATTACTG CGTGTGGCGG AGCCAGTGCC ATGTTATTAA ATGAAGGCGT CACTCGTACC CCTGCCTTTG CCTTTTATAA CTTAGCCGAA GCCGGACAAT TTGTGACGTG GGCCGTTACT CAATACGATA CCTTCAAGCA ATTGGCTGAA GCCACTACCT CTCACGGTAA ACTCAGCGAC ATTAATATCA GCATTGAAGG CAATCATGTC TATTTGGTAT TTGAGTTTTT AACCGGAGAT GCATCAGGCC AAAACATGGT GACCATCGCG ACTAATGCGA TTTTTAACTA CATCATAGAT AACTCACCCA TCGCTTCTGA AAATGCCTAT TTAGATGGCA ACTTATCAGG CGATAAAAAA GCAAGTAGCC AGTCTCTCCG CAGTGTTCGC GGTAAAAAGG TAACGGCGGA AGTGCATGTT CCCGCCGAAC TGGTTAAGAA ATACCTGCAC ACTACACCAG AAAAAATGAT GCAATTTACT CAAATGAGTA CGGTTGGAGC AACGCTCAGT GGCACAATTG GCATTAATGC TCATTACGCG AATGCACTTG CGGCGCTCTA TATTGCGTGT GGCCAAGATG CCGCGTGCGT GGCAGAATCG GCTGTGGGGA TGACTCGTAT AGAAGTAAAT AGAGATGGTG GTTTATACGC AAGTGTGACG CTACCAAATC TAATGCTTGG CACGGTTGGC GGTGGAACGG GATTACCGAG CCAAAAAGCG TGTTTAGAAC TAATGGGCTT ATATGGCTCA GGTAAATCAC AAGCACTTGC TGAAGTATGT GCCACGCTAT GTTTAGCAGG AGAGCTGTCT ATTGTCGGTG CTTTCTGTGC CGGTCATTTT TCACGAGCGC ATCATAAATT GGCTCGCTAG
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Protein sequence | MPKLNLHRRD YVSILGGDIS ADELEQMLNP HFDKPTNKLT PSPYLTDKNI TRRWDKLANP ALQAELLDVH TQAQSHVYEK NIEHFIGTVK IPVGLAGPLR VNGLFAKGDY LVPLATTEAA LVASYNRGAQ LITACGGASA MLLNEGVTRT PAFAFYNLAE AGQFVTWAVT QYDTFKQLAE ATTSHGKLSD INISIEGNHV YLVFEFLTGD ASGQNMVTIA TNAIFNYIID NSPIASENAY LDGNLSGDKK ASSQSLRSVR GKKVTAEVHV PAELVKKYLH TTPEKMMQFT QMSTVGATLS GTIGINAHYA NALAALYIAC GQDAACVAES AVGMTRIEVN RDGGLYASVT LPNLMLGTVG GGTGLPSQKA CLELMGLYGS GKSQALAEVC ATLCLAGELS IVGAFCAGHF SRAHHKLAR
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