Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0245 |
Symbol | |
ID | 6961709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 268428 |
End bp | 271004 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643381552 |
Product | nitrite reductase large subunit |
Protein accession | YP_002264594 |
Protein GI | 209809056 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCACTCT CCTTGCTGAA TGTGTTTATA CATTTTACAA AGGAGAGACT GATGAGAAAA CAGCGGATTG TAGTGATAGG AAACGGCATG GTAGGCCACA AATTCATCGA GACGTTACTT GCTTCTGGGC AAGAAAACAA TGAAGTCATT ACCTTTTCTG AAGAGTCTCG ATTAGCGTAT GACCGTGTGC AACTAACGTC ATATTTAACA GGTAAAACCG CCGATGATTT GGCGTTAACA ACCGATACGT ATTACCAAGA AAATGGCGTT AATTTTATCT TAAACGAAAA AGTAACCGTC ATTGATATTG AGAACAAACA GGTGATTACG GAGAGTGGAC GAACTGAACT GTATGACAAA TTGGTACTAG CCACTGGTTC GTTTCCTTTT GTTCCCCCCA TCCCTGGAAA TGACCAAGAA CATTGCCATG TTTATCGTAC TCTTGATGAC TTAGACGCAA TAGAAGCGTC CAGTAAGAAG AGTAAAAAAG GAGTGGTTAT TGGTGGTGGT TTATTAGGGT TAGAAGCGGC GAATGCGGTT AAGAATTTAG GACTAGAAAC ACACGTTGTC GAGTTTGCTC CACGATTAAT GGCGGTGCAA TTAGATGATG GTGGTGGTGC GTTATTACGA CGTAAAATTG AAGGGTTAGG CGTTGTCGTT CATACAGAAA AAGCGACAAC AGAAATCGTG GCAGGGAAGG AATCTCGCTA TCGTATGAAC TTTGTGGATG GTTCTTATTT AGAAACCGAC ATGATTGTGT TTTCTGCCGG TATTCGCCCG CAAGATGCGT TAGCTAAAGA GACCGACATT CAATTAGGAG AACGTGGCGG AATTGCCATT AATAATCAAT GCCAAACCTC GGTTGAAAGC ATTTATGCGA TTGGTGAATG TGCATTGTGG CAACAGCAGA TTTTTGGGCT AGTTGCGCCT GGTTACCAAA TGGCAAAAGT CGCGGCTAAC CATATTTTAG GCAAAAAAGC CGAATTCTCT GGTGCAGACA TGAGCACTAA ATTGAAGCTT TTGGGCGTTG ATGTTGCCAG TATCGGCGAT GTTCATGGAA AAACAAAAGG TGCACAATCA TACACTTATC ATGATGAAAT TGAGCAAATA TATAAACGAT TAATCATCTC GAAAGATGGT AAGAAAATTG TTGGTGCAGT ATTGGTTGGA GATGCTGAGG CTTACGGGAC ATTATTGCAA ATAAAGCAAA ACGACATGGC GTTGCCAGCG CAGCCTTCGG TCTTAATCTT ACCCAATGTG AAAGATGACG AATCAGCTGG AATGGGTGTA GAGGCCTTAC CTGATGCTGC TGTTATTTGT TCGTGTTTTG ATGTAAAGAA AGGCGATATA AAACAAGCGG TTGCTTCTGG CTTCACCAGT ATGATAATGC TTAAAGAAAG CACTAATGCA TCAACAGGTT GTGGTGGTTG TTCAACATTA GCAAAACAAA TATTAGACAG TGAATTGAGT CAACTAGGTG TCGAGGTTAA TAACCATTTA TGTGAACATT TTTCTTATTC TCGACAAGAA ATGGTCGACA TTATTCGTAT TAATAAAATT AAAACATTTG ATGAGATATT AGAAAGCCAC GGCTCTGGTT TAGGCTGTAT TACTTGTAAG CCTACTGTCG GTTCTATTTT AGCCTCATTT TGGAATGATT ATGTGCTCGA AGATAACCTT GCAGAACTGC AAGACACCAA TGATATCTAC CTTGGTAACA TGCAAAAAGA CGGTACGTAT TCAGTTGTCC CACGTATTGC TGGAGGGGAA ATCACACCTG ATAAATTGAT AGTGTTGGGT GAGGTCGCAA AAGAGTTTGG TTTATACACC AAGATCACTG GCGGCCAACG AGTGGATTTG TTTGGGGCAC ATCTTAGCGA ACTGCCTGTC ATTTGGAAAA AACTAATTGA TGCCGGATTC GAAACAGGTC ACGCGTACGG GAAATCAGTC CGAACGGTTA AGTCTTGTGT TGGCAGCACA TGGTGCCGTT ATGGCGTTAA TGACAGCGTT GGTTTAGCGA TTAAATTAGA GAATCGTTAC AAAGGCTTAC GCTCTCCTCA TAAAATAAAG TTTGCGGTAT CGGGGTGTAC TCGTGAATGT GCAGAAGCCC AATCTAAAGA CATTGGTGTC ATTGCCACTG ACAGAGGTTG GAATTTATAT GTGTGTGGTA ACGGCGGGAT GCGTCCACGT CATGGGGACT TGTTTGTTAC TGATTTAGAT GAATCTACCT TAGTGCAATA TATCGATAGA TTATTAATGT TTTATATTCG TACCGCTGAT CGCTTGCAAC GTACTTCTGT TTGGCTAGAG AACTTAGAAG GAGGCTTAGA GTATTTACGA TCGGTCATTG TGGATGACTC TCTTAATCTT GGCGAAACCC TAGAGGCTGA GATGGAACAC AATATTGCGC AATACCAATG TGAATGGAAA ACCACGATTG AAGATCCTGA AAAACTAAAG CGATTCCAAC ACTTTATCAA TAGTAAAGAG ACCGATGATG GGGTTGAGTT TGTAAAACAG CGTGAGCAGA AGTTCCCTAA AGCTAAAAGC GACAGCCTGT TATTGAAATC ACGTTGA
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Protein sequence | MALSLLNVFI HFTKERLMRK QRIVVIGNGM VGHKFIETLL ASGQENNEVI TFSEESRLAY DRVQLTSYLT GKTADDLALT TDTYYQENGV NFILNEKVTV IDIENKQVIT ESGRTELYDK LVLATGSFPF VPPIPGNDQE HCHVYRTLDD LDAIEASSKK SKKGVVIGGG LLGLEAANAV KNLGLETHVV EFAPRLMAVQ LDDGGGALLR RKIEGLGVVV HTEKATTEIV AGKESRYRMN FVDGSYLETD MIVFSAGIRP QDALAKETDI QLGERGGIAI NNQCQTSVES IYAIGECALW QQQIFGLVAP GYQMAKVAAN HILGKKAEFS GADMSTKLKL LGVDVASIGD VHGKTKGAQS YTYHDEIEQI YKRLIISKDG KKIVGAVLVG DAEAYGTLLQ IKQNDMALPA QPSVLILPNV KDDESAGMGV EALPDAAVIC SCFDVKKGDI KQAVASGFTS MIMLKESTNA STGCGGCSTL AKQILDSELS QLGVEVNNHL CEHFSYSRQE MVDIIRINKI KTFDEILESH GSGLGCITCK PTVGSILASF WNDYVLEDNL AELQDTNDIY LGNMQKDGTY SVVPRIAGGE ITPDKLIVLG EVAKEFGLYT KITGGQRVDL FGAHLSELPV IWKKLIDAGF ETGHAYGKSV RTVKSCVGST WCRYGVNDSV GLAIKLENRY KGLRSPHKIK FAVSGCTREC AEAQSKDIGV IATDRGWNLY VCGNGGMRPR HGDLFVTDLD ESTLVQYIDR LLMFYIRTAD RLQRTSVWLE NLEGGLEYLR SVIVDDSLNL GETLEAEMEH NIAQYQCEWK TTIEDPEKLK RFQHFINSKE TDDGVEFVKQ REQKFPKAKS DSLLLKSR
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