| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0141 |
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| Symbol | |
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| ID | 6961619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 162613 |
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| End bp | 163335 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381461 |
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| Product | hypothetical protein |
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| Protein accession | YP_002264503 |
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| Protein GI | 209808965 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.829283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAGAA GTTTTGAAGT GCGCAAGTCT TCAATGGCTA AAACACAAGG CGCAAAAATC
AAAGTTTATT CTAAATACGG TAAAGAAATT TACATGTGTG CTAAGAATGG CGGTCCTGAT
CCAGACATGA ACTTGTCTCT AAAACATCTT ATTTCGAAAG CGAAAAAAGA TCAGGTTCCT
ACACACATTA TTGATAAAGC AATCGACAAA GCAAATGGCG GTGGTGGTGA AGATTACCAA
CACGCACGCT ATGAAGGTTT TGCGCCAGGC GGCGCAAGCG TAATCGTTGA TTGTTTAACA
GACAATGGCA ACCGTACTTT CCAAGACGTT CGTCAATGTT TTGTTAAAAC AGGCGCTAAA
ATTGGTAGCC CTGGTACAAG TTCTCACATG TTTGATCACC AAGCTGTATT CCAGTTTAAA
GGTGAAGATG AAGAAGCAGT ACTTGAAGCA TTAATGATGC AAGACGTTGA TGTCACTGAC
ATTGAACTTG AAGATGGCGT GATCACCGTA TTTGCACCAA ACACTGAGTT CTTTAAAGTG
AAAACAGCAC TGGCTGCTGA ATACCCTGAT CTAGTGGTCG ATGTGGAAGA AATTACGTTT
GTTCCTCAAA ACCCAATGGA AATAACGGGT GAAGATGCTG AGAAATTCCA AAAATTCTTA
GATCTATTAG ACGATTGTGA TGACGTTCAA CAAGTTTATC ATAACGCGGA ATTAGAAGAT
TAA
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| Protein sequence | MGRSFEVRKS SMAKTQGAKI KVYSKYGKEI YMCAKNGGPD PDMNLSLKHL ISKAKKDQVP
THIIDKAIDK ANGGGGEDYQ HARYEGFAPG GASVIVDCLT DNGNRTFQDV RQCFVKTGAK
IGSPGTSSHM FDHQAVFQFK GEDEEAVLEA LMMQDVDVTD IELEDGVITV FAPNTEFFKV
KTALAAEYPD LVVDVEEITF VPQNPMEITG EDAEKFQKFL DLLDDCDDVQ QVYHNAELED
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