Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0107 |
Symbol | |
ID | 6961589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 130965 |
End bp | 132158 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643381431 |
Product | transposase |
Protein accession | YP_002264473 |
Protein GI | 209808935 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCAT ATAAACCCCT GAAACAATTA TTTAATAGTC AAAATAACTG GCTTAAATTT CTTCATAATA ACAAAGCTAA CCTAAGAGCG GTCGTGATTG AAAATGTCAC AAAGATGCTG TCCTGTGGGA CAGCGGCTTT TGGCTCTCGC GAATATCATT GTTGCAACCC TGACTGTACC CATATCAAAT ATATTCACCA AACCTGTAAA TCTCGAGCGT GCAGTAGCTG TGGCATGAAA GCCACAGAGC GATGGATACA AAAGCAACAA CATGTCTTCC CTGAATGCGA ATATCAACAC ATCACCTTTA CCCTTCCAAA CACGCTATGG CCTATCTTTC GTCATAACCG TTGGCTGTTA AATAAATTAT TCAAATGTGC TGCAAACATT CTGCTGGGAT GGGCAAAAGA TAAAGGAATA GATGTCGGTA TCTTTTGTGC TCTTCATACT TACGGTCGAA AACTGAATTG GAATACGCAC TTACATTTAT CGGTCACTCG TGGGGGAATT TGTGAACGTA CCGGTTTATG GAAACCCATT TACTTCCAAA TGAAAACGAC AGAGCCTTGT TGGAGAGCGG CTATCGTCAG TTTATTGGGT AAGGCTTATT ATGAGCTTGA TTTATCAAGC GAAGAATGCC CCTATATCCG TAATAAAACG GATTGGTCAC GCTTTTTAAG CAGTCAATAT AATCGTCGTT GGAAGCTTCA TTTTGCTAAA AAGACAAATA ATGTAAAACC GACGATGAAC TATCTTGGTC GGTATTTAAA ACGGCCCCCG ATTTCAGCGT CACGTTTAAG TCATTACGCC AAAGGCGGAA TGATAACGTT TAATTATTTA GACCATCGAA CAGGAACAAC AGACAGCCTA ACATTATCAC CAGAAGAGAT GATAAGACGG ATAGTAGAGC ACTATCCTGA TAAACATTTC AAGATGATCC GATACTACGG TTTTTTATCA ATGCGTCGTC GTGGAGAAGC TCTGCCTAGA GTTTATGCAG CTTTAGGTAT GACAATAGAA GCTGAGCCGA AAATGCCAGG GTATGCCGCA ATGTTAAAAG GATATGTAAA AGTAGATCCG TACGAATGTA TTTTATGTGA AAGTCGTCTG GTGTTTACGA ATTTCCGAGT CGGAAATTCG GTCAATGATT TAGTCACCCA TGCGATAGTT CAGTCAGAAT TGAGGGCAGC ATAA
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Protein sequence | MHAYKPLKQL FNSQNNWLKF LHNNKANLRA VVIENVTKML SCGTAAFGSR EYHCCNPDCT HIKYIHQTCK SRACSSCGMK ATERWIQKQQ HVFPECEYQH ITFTLPNTLW PIFRHNRWLL NKLFKCAANI LLGWAKDKGI DVGIFCALHT YGRKLNWNTH LHLSVTRGGI CERTGLWKPI YFQMKTTEPC WRAAIVSLLG KAYYELDLSS EECPYIRNKT DWSRFLSSQY NRRWKLHFAK KTNNVKPTMN YLGRYLKRPP ISASRLSHYA KGGMITFNYL DHRTGTTDSL TLSPEEMIRR IVEHYPDKHF KMIRYYGFLS MRRRGEALPR VYAALGMTIE AEPKMPGYAA MLKGYVKVDP YECILCESRL VFTNFRVGNS VNDLVTHAIV QSELRAA
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