Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0102 |
Symbol | |
ID | 6961584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 125864 |
End bp | 127009 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381427 |
Product | peptide methionine sulfoxide reductase |
Protein accession | YP_002264469 |
Protein GI | 209808931 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTACC GATTAAAAAT TACAACGATA GCACTACTGT TTATTCCATT TTTTGCTGTC ATGACCAGTT TTTTTTCAAC CGCTGAAGAT ATGTCTACGC TGAAGAAAGG AAACTACGAA GTTGCAACAT TGGCGGGAGG CTGTTTTTGG TGTACGGAAT CTGATTTAGA AAAGTTAGAT GGGGTGGTGG ATGTGGTATC CGGTTATTCA GGAGGCTCAC TTGAAAACCC TACCTACAAA CAAGTGTCAT CAGGAAAGTC TGGACATATT GAAGTAATTC AAGTGACGTT TGATCCTAAG ATCGTTAGCT ATGAGCAGGT GCTTGATCAG CTATTTAGGC ATATGGATCC AACGGATAGC AAAGGCTCAT TCGTTGATAG AGGTCCACAA TATCGTCCCG CTATTTTCTT CCATAATGAA GATCAGCAAG TGATTGCTCA AGAGTTCATG AATGCGATTG ATGCGGCGGG AATTTACCCA AAACCATTAG CAACAGAGCT AATTGAGTTT GAGAAATTTT GGCCAGCAGA AGATTATCAT CAAGATTATT ACAAAAATAA TCCAGTACGT TATAAGTATT ACCGTTACAA CTCAGGACGT GATCAGTACT TAGATGCGGT GTTTGGTGAA GATAGAAATG AGAATCCAAA GACATTACGC CAATACATTG ATGAGAAAAC AATGGCGCAA AACGTAAAGC CATACAATAA GCCATCAGAC TCTGAGATTA AAAAGATGCT GACGGACCAA CAATATTACG TAACGCAAGA GGAAGGAACC GAGCGCCCGT TCAATAATAA ATATTGGGAT AATAAAGCCG AAGGTATTTA TGTTGATATC GTCAGTGGTG AGCCGTTATT TTCATCAACC GATAAATACA AATCAGGCAC GGGATGGCCA AGTTTTACTA AGCCAATCAA TAAAGCATAT ATTGCTGAAG AAGATGATTT TGCATTATTC AGTAAACGTA CCGAGATCCG CAGTAAGTTT GCAGACTCAC ATTTAGGGCA TGTTTTTAGT GATGGACCGA AACCAACGGG GTTACGTTAC TGCATGAACT CAGCTGCAAT GCGTTTTGTA GCAAAATCAG ATTTAGAGAA AGAAGGCTAT GAAGAATATT TGTATCTGTT TAATCAATCG TCGTAA
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Protein sequence | MKYRLKITTI ALLFIPFFAV MTSFFSTAED MSTLKKGNYE VATLAGGCFW CTESDLEKLD GVVDVVSGYS GGSLENPTYK QVSSGKSGHI EVIQVTFDPK IVSYEQVLDQ LFRHMDPTDS KGSFVDRGPQ YRPAIFFHNE DQQVIAQEFM NAIDAAGIYP KPLATELIEF EKFWPAEDYH QDYYKNNPVR YKYYRYNSGR DQYLDAVFGE DRNENPKTLR QYIDEKTMAQ NVKPYNKPSD SEIKKMLTDQ QYYVTQEEGT ERPFNNKYWD NKAEGIYVDI VSGEPLFSST DKYKSGTGWP SFTKPINKAY IAEEDDFALF SKRTEIRSKF ADSHLGHVFS DGPKPTGLRY CMNSAAMRFV AKSDLEKEGY EEYLYLFNQS S
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