Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0010 |
Symbol | |
ID | 6961504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 10763 |
End bp | 12406 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643381344 |
Product | hypothetical protein |
Protein accession | YP_002264390 |
Protein GI | 209808852 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.736924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAGC ACTTTTTGGC ATTTTCAGAA AATGAATCTG TTGTACATTT TACTATTCCT GAAAACACCA CGTTAACTCA ACCGATTGAA GCGGCAGATA TTCATCATGC TTTGCATACG ATGGGGGCCA ATGAGTATTA TTTGTTTGAA AATAAATTAG AAGACATTCT ATCTGCATTC AATAAAGGTG ATTTCACCGC CATAACAAAT ACATTAATTG CTCAACGTTT AGATGCACAA CTCTCTATCC ACCTTCAAGA AGATGAAATG ATCGCTTCTA TGACCGTCAC TGGTGCGTAT GGAGGTCACT CTGTACGTGG TCCCGCTATT GTTGCAGCCC TAACAGAAAA TTATATTTTA AAAGGCATCA AAAAAGAAAA TCTTAAAACC TTATTATTAA AAAGCAAAGC GCTCACTCCT GGAGAAACGT ATTCAGACAT CATTGCTGTA GGTCGAGAAG CCATACAGGG TGAAGACACT GTCTTTATCG CCTCAGTTCC TAATATTCGC GAACGTATTT TGCAGCCACA AAAAACGACT GATGGTCATG TGGATATGCG TAATTTAGGC GAAGTCATTA GTGTAAAGAA AAATACGCCC TTAATGACAC GAATCCCCGC AACTCAAGGT GTCGATGGGA AAACAGTGAC AGGAAAACGG ATCGCCGCAG TCCCAGGTAA TGAACACTTC TTTCATCTTT ATCCTGGCTC ATCAATTTCT CTCGTTGATC CTAATTTACT TATTTCTGAT ATTGATGGTA CCCCATTAAT TCATGGTTCT GGTGTTGCTA TCGATAATTT ACTAACACTA AAAACAGTCA ATGCGACCAC TGGACATGTG TCATTTGAAG GCAGTATTTT TATTCAGGAA GACATTGAAT CAGGAATGAA AGTCACTGCA ACAGGAGGGA TTACTGTTGG TGGCTTTATA GAAAATGCTG AAGTCATTGC AAAACACGAC ATCACAGTAA TGAATGGCAT CATTGGCCGC CCAATGCCAG AAGGTGAAGC TCTAACTTGC TTGGTAAATA CCGAAGGGTC AATAACGACT AAGTTAGCTC AAAATGCGCA TTTAATCGCA CACGATGATA TTCACATTAC ATTGCATGCA AATCATTGCT TAGTCGAGTC TTTAGGCTCT ATTTTTGTTA TTGATAAAGC AGAAAGAAAT GGCACAATCA GTGGCGGAAG TGCGACGGCA AATGGCTCAA TCAAAACCGC AAATTTAGGG ATTGAAGGCG GGGCTTACAC TAAGGTTCAT GCTTTTCATA ACTTCACGGA TCAAAAAGAA ACGCTTCATT CATTGCAAAA ACGTTTTGAT GACGTAAGTG CTCAAATCAT CAAAATGTCA CAAATAAACA TTGCCCGTCA ATCTCCTGAG CTCGCAGAAA AAATTCTGAG ATCCAAAGAG CAATCCAATC AAGATCTCCT TATTTTAAAA TCTGAATTAG CAAAAGAGCA AATTACCTTT AATAAAGGGT TGAAAGAAAA TCATGTCTTT GTAACGAATA AAATTTTTCC TCGTGTAGAC GTTCAATTCA ATACTGAACA TTTAGTAACG AAGAGAGAAT ACAGTCCAAG CAAGATATCT TACTCTGGCT ACGACATCGA TATTGAGCCA GTAATGATCA AGAAAAAATA TTAA
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Protein sequence | MIEHFLAFSE NESVVHFTIP ENTTLTQPIE AADIHHALHT MGANEYYLFE NKLEDILSAF NKGDFTAITN TLIAQRLDAQ LSIHLQEDEM IASMTVTGAY GGHSVRGPAI VAALTENYIL KGIKKENLKT LLLKSKALTP GETYSDIIAV GREAIQGEDT VFIASVPNIR ERILQPQKTT DGHVDMRNLG EVISVKKNTP LMTRIPATQG VDGKTVTGKR IAAVPGNEHF FHLYPGSSIS LVDPNLLISD IDGTPLIHGS GVAIDNLLTL KTVNATTGHV SFEGSIFIQE DIESGMKVTA TGGITVGGFI ENAEVIAKHD ITVMNGIIGR PMPEGEALTC LVNTEGSITT KLAQNAHLIA HDDIHITLHA NHCLVESLGS IFVIDKAERN GTISGGSATA NGSIKTANLG IEGGAYTKVH AFHNFTDQKE TLHSLQKRFD DVSAQIIKMS QINIARQSPE LAEKILRSKE QSNQDLLILK SELAKEQITF NKGLKENHVF VTNKIFPRVD VQFNTEHLVT KREYSPSKIS YSGYDIDIEP VMIKKKY
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