| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I3058 |
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| Symbol | atpC |
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| ID | 6988592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3313708 |
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| End bp | 3314130 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643381327 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_002264373 |
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| Protein GI | 209696442 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGCAA TGACCTTTCA TCTGGACGTT GTAAGTGCTG AGAAAAGTTT ATTCTCAGGG
CTTGTTGAAA CGATTCAGGT GACCGGTAGC GAGGGTGAAC TTGGTATTTT CCATGGACAC
ACACCGCTGC TGACCGCTAT CACGCCTGGT ATGGTGCGTA TTGTTAAACA ACATGGCCAC
GAAGAGTACA TTTATGTCTC TGGTGGTATT GTTGAGGTTC AACCTGGTTC GGCAACTGTT
CTCGCAGATA CCGCTATCCG TGGTGAAGAC CTAGACGCAG CTAAGGCAGA AGAAGCTAAA
CGCAAGGCTG AGGAAAATAT TAAGAATCAG CATGGCGACA TTAACTTCGC TCAAGCGGCC
AGTGATTTGG CTAAAGCGAT CGCACAGCTT CGAGTTATCG AACTGACAAA ACGTTCGCGT
TAA
|
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| Protein sequence | MAAMTFHLDV VSAEKSLFSG LVETIQVTGS EGELGIFHGH TPLLTAITPG MVRIVKQHGH
EEYIYVSGGI VEVQPGSATV LADTAIRGED LDAAKAEEAK RKAEENIKNQ HGDINFAQAA
SDLAKAIAQL RVIELTKRSR
|
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