Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I3032 |
Symbol | |
ID | 6988036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 3282275 |
End bp | 3282823 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381307 |
Product | galactosyl transferase, capsular polysaccharide synthesis enzyme |
Protein accession | YP_002264353 |
Protein GI | 209696422 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACGTA TTATCGATTT CTTCGCAGCC TTTTTCGGTT TGCTTTTCTT ATGGCCAGTT CTGCTTATCG TAACTATTAT TGGCTTGTTT GATACCGGTT CCCCAATCTT CATTCAAGAA CGAGTAGGGC GTAATAAAAA GCCGTTTAAA CTTATTAAGT TTCGCACTAT GTCTGTTGAA ACTAAATCGG TAGCTAGCCA CTTAGCAAAT AATGCATCAA TCACAAAGCT TGGTAATTTT TTGCGCAAGA CCAAAATTGA TGAGTTGCCT CAGCTCATCA ACGTGGTGAA AGGTGAAATG AGCTTGGTTG GCCCTCGTCC AAACTTATTT AACCAAGACG ATCTAATTAA AGAGCGTGAT GCATTAGGGG TATATGATGT ACTTCCCGGT GTAACAGGTT TAGCTCAAGT TCAAAATATC GATATGTCTA CACCACAATT GTTAGCTAAA ACTGACAAGC AGATGATTGA TACGTTAACC ATTAAAGATT ACTTTAAATA CATCATCATG ACAGCGACAG GCAGTGGCTC GGGTGATGCG GTAAAATAA
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Protein sequence | MIRIIDFFAA FFGLLFLWPV LLIVTIIGLF DTGSPIFIQE RVGRNKKPFK LIKFRTMSVE TKSVASHLAN NASITKLGNF LRKTKIDELP QLINVVKGEM SLVGPRPNLF NQDDLIKERD ALGVYDVLPG VTGLAQVQNI DMSTPQLLAK TDKQMIDTLT IKDYFKYIIM TATGSGSGDA VK
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