| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2995 |
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| Symbol | rmuC |
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| ID | 6988015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3244906 |
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| End bp | 3246426 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381272 |
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| Product | DNA recombination protein RumC |
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| Protein accession | YP_002264320 |
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| Protein GI | 209696389 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTT TGAATCAGTT TGGTGGGCAT TTATTGTTTG GTTTTTCAGG AGCAGTGGTT
GCTTACGCTG TCGCCTATAC ATTAACGAAA AGCCGTAACG AACAAGCATT GGCATTATTA
GAGCAATCAT TAGAGTCAGA AAAAAAACTC GCGAGTACTC AATTGAGTCA ACTTAATCAA
CAGGTAGATA AGCAACAGGC AGAGCTTGAT GAGCTAGACA TTGAAAGAGA TAAACTGGTT
CAAGAGCAAA AGCAATTTCA TGGTCGTCTA ATGGCTGCGA TGGAAAAACT GCGTTACTTT
GATGCCATTC AAAAAGAAAA AGAATTTCTC ACACAACAAC TTGAGTTTTC TCGTCAAACG
AATTCCAATA TTGAAGCTGA ATTGCGTGAA CAAGAAGCGC GACACGAAGA AGAGCGCAAA
GCAAGCCAAG AAAAACTCGA GATACTAGAG CGTGCAGAGC TGCGTTTAAA GGAACAGTTC
GAGAATTTAG CCAACCAATT GTTTGAGCAG AAAACGAAAA CCGTTGATGA GCAAAATAAA
GTGAGTTTAG AGGGCTTGTT GTCGCCATTA AAAGAACAGC TTGAAGGATT CAAAAGACAG
GTTAACGACA GTTTTGGTCT TGAAGCCAAA GAGCGTCACA CGTTAGTGCA TGAAATTCGC
AGCTTACAAC AGCTTAATGA ACGCATGACA CAAGAAGCGG TAAACCTGAC TAACGCCTTA
AAAGGTGACA ACAAACAACA AGGTAATTGG GGTGAAGTTG TTCTTGGTCG AGTGTTAAAA
GAATCGGGGT TACGTGAAGG TCATGAGTAC GATACCCAAG TCAGTATGGA TGACGACGAG
GGTAAGCGCT TTTATCCTGA TGTGATTGTT CACTTACCTG ACGAGAAAGA TGTCGTGGTC
GATTCCAAAA TGACCTTGGT TGCCTACGAG CGATTTTTTA ACAGCGATGA CTTTAATCAA
AAAGAGCAGG CGCTTGATGA ACACCTTATG GCCATTCGTG CTCATTTACG TGGTTTAAGC
AAAAAGGATT ACCACAAATT AAATGGCTTA CGCAGCTTGG ATTATGTCTT GATGTTTATT
CCAGTTGAGC CCGCTTTTCA GGTGGCGATT GAAGCCGATC CTTCGTTAAT CTCGGATGCG
ATGGAGCAGA ACATTATCAT TGTAAGCCCA ACAACATTAC TGGTTGCACT CAGAACCATC
AGTAACTTAT GGCGCAATGA AAGACAGAAT CAAAACGCGA AAATTATTGC TGAACGAGCC
ACGAAGCTGT ACGACAAAAT GCGATTGTTT GTGGATGACA TGGAAGCGGT CGGCGGTGCA
TTAGATAAGG CAAATCAAAG CTACCAAGGC GCAATGAATA AATTGGCAAC AGGAAGAGGG
AACATCATTC GCCAAGCGGA AAGCTTTAAA GAGCTTGGTG TAGAAGTAAA ACGAGACATA
AATCGTCGTC TTATTGAGCA ATCTTTTGAA GCCGATGCCA TGCAAACGCT TGGTGATAGT
GGGTCGGATA AAGTAGACTA G
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| Protein sequence | MDFLNQFGGH LLFGFSGAVV AYAVAYTLTK SRNEQALALL EQSLESEKKL ASTQLSQLNQ
QVDKQQAELD ELDIERDKLV QEQKQFHGRL MAAMEKLRYF DAIQKEKEFL TQQLEFSRQT
NSNIEAELRE QEARHEEERK ASQEKLEILE RAELRLKEQF ENLANQLFEQ KTKTVDEQNK
VSLEGLLSPL KEQLEGFKRQ VNDSFGLEAK ERHTLVHEIR SLQQLNERMT QEAVNLTNAL
KGDNKQQGNW GEVVLGRVLK ESGLREGHEY DTQVSMDDDE GKRFYPDVIV HLPDEKDVVV
DSKMTLVAYE RFFNSDDFNQ KEQALDEHLM AIRAHLRGLS KKDYHKLNGL RSLDYVLMFI
PVEPAFQVAI EADPSLISDA MEQNIIIVSP TTLLVALRTI SNLWRNERQN QNAKIIAERA
TKLYDKMRLF VDDMEAVGGA LDKANQSYQG AMNKLATGRG NIIRQAESFK ELGVEVKRDI
NRRLIEQSFE ADAMQTLGDS GSDKVD
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