| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2990 |
|---|
| Symbol | |
|---|
| ID | 6988010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 3239242 |
|---|
| End bp | 3241035 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643381267 |
|---|
| Product | putative metallopeptidase |
|---|
| Protein accession | YP_002264315 |
|---|
| Protein GI | 209696384 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTAC ACACTTCTCA GCGTATTGAA CAACTTCGCT CATGGCTTGC TCAACAACAT
TTAGATGCAC TTATTATTCC TCATGAAGAT GAATTTTTAG GTGAATACAT CCCTGAGCAT
AACGAACGTC TGTTATGGGC AACAGGATTC ACCGGTTCAG CTGGTGCCGC CGTCATAACA
AAAGACAACG CCGCGATTTT TGTTGATGGC CGTTACACGG TTCAAGTTCG TAAACAAGTG
CCAGCAGAGG TATTTGAGTA CCGTCATTTA CATGAAGAAC CTTTATTGGA GTGGATTAAA
AATTCTCTAC CTACTGGCTC AAAAGTTGCC ATCGACCCTC GTATGCATAC CGCACAATGG
TTACGTAATG CTAAAGCAGT TATTGAAGGA CACGCCTCTC TTGAGATGCT AAACAGTAAT
CCAATCGATC GCTTATGGTC AGATCGTCCA GCAGTTAAAG TGTCTGACGT TCGCTTAATG
GGATTAGCGC TTGTTGGTCA ATCAAGCGCA GATAAACGTA AAGAAATTGC AGGTGTCATC
GCAAATAAAA AGGCAGACGC CGCCCTATTA ACGCAACTTG ATTCTATTTG TTGGTTACTG
AATGTGCGTG GTTTGGATGT CTCTCGCCTT CCTGTTTTGT TATCACACGC CATCATTCAT
GCTGACGAAA GTGTCGACTT TTTCCTAGAC CCAACTCGTC TTCCTACCAA CTTCATTGAA
CATGTAGGTC AAGGGGTTCG AATTCACAAA CCTGACGCAC TGCAATCGAC TCTGCAATCG
CTTGTTGGTC AAAAAGTCTT GGTTGATTCA GCAACATCGA ACGCATGGAT GTCATTGATT
CTATCTGACG CTAAAGCCGA AATTATAGAA GCTGCTGATC CATGCCTATT ACCAAAAGCA
GCCAAAAACG AAACAGAAAA ATCAGGAATG AAAGCGTGTC ACATTCGTGA TGGTGCCGCG
ATGGTTAAGT TTTTAACGTG GTTTGATGCA GAAATCGATG CAGGAAAATT GCATGATGAA
TCGGTACTTG CGGATAAACT TCAAGGTTTC CGTGAAGAAG ATGACACTTT GGCTGATTTA
AGTTTTGATA CCATTTCAGC CGCCGCAGGT AATGCATCGA TGTGTCACTA CAATCACGAA
AACCAACCTG AGCCAGGTAA GCTACAAATG AACAGCTTAT ACCTTGTTGA TTCAGGCGGC
CAATATCCAG ATGGCACAAC CGACATTACG CGTACACTTC CTGTTGGAAC ACCAAGTGAT
GACATCAAGC AGCAATTCAC CCTTGTTCTA AAAGGCCACA TTGGATTGGC ATCAGCACGC
TTTCCAAAAG GCACTTGTGG TCATCAGTTA GACATTCTTG CTCGTCAACA TTTATGGGCA
CAAGGCTACG ACTATGATCA TGGAACGGGT CACGGCGTTG GTCACTTCTT AAGTGTTCAT
GAAGGCCCAC AGCGCATCGC TAAAGTCGTC AATAATACCG CTCTACTTCC GGGTATGGTT
CTGTCTAATG AGCCGGGATA TTACCGTGCA GATGAGTTTG GTATTCGTAT TGAAAACTTA
GAATTAGTTG TCGAAATAGA AACCAAAGGC GATTTCTCTG TTCTTGGTTT TGAATCATTA
ACACGTTGCC CAATCGACAA ACGTCTCATT AATGTTGATA TGCTAAATCG CCCAGAACTG
GCTTGGTTAA ATTCCTACCA TCAGAAAGTG TGGAATGACG TCAGTCCATT AGTGAATGGC
GAAGTAAAAG AATGGCTAAA ACAAGCAACA GAAGCGCTTA GCTATGAAGA CTAA
|
|---|
| Protein sequence | MHLHTSQRIE QLRSWLAQQH LDALIIPHED EFLGEYIPEH NERLLWATGF TGSAGAAVIT
KDNAAIFVDG RYTVQVRKQV PAEVFEYRHL HEEPLLEWIK NSLPTGSKVA IDPRMHTAQW
LRNAKAVIEG HASLEMLNSN PIDRLWSDRP AVKVSDVRLM GLALVGQSSA DKRKEIAGVI
ANKKADAALL TQLDSICWLL NVRGLDVSRL PVLLSHAIIH ADESVDFFLD PTRLPTNFIE
HVGQGVRIHK PDALQSTLQS LVGQKVLVDS ATSNAWMSLI LSDAKAEIIE AADPCLLPKA
AKNETEKSGM KACHIRDGAA MVKFLTWFDA EIDAGKLHDE SVLADKLQGF REEDDTLADL
SFDTISAAAG NASMCHYNHE NQPEPGKLQM NSLYLVDSGG QYPDGTTDIT RTLPVGTPSD
DIKQQFTLVL KGHIGLASAR FPKGTCGHQL DILARQHLWA QGYDYDHGTG HGVGHFLSVH
EGPQRIAKVV NNTALLPGMV LSNEPGYYRA DEFGIRIENL ELVVEIETKG DFSVLGFESL
TRCPIDKRLI NVDMLNRPEL AWLNSYHQKV WNDVSPLVNG EVKEWLKQAT EALSYED
|
|---|
| |