Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2936 |
Symbol | |
ID | 6987980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3181638 |
End bp | 3182537 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643381214 |
Product | putative acyltransferase |
Protein accession | YP_002264264 |
Protein GI | 209696333 |
COG category | [R] General function prediction only |
COG ID | [COG2153] Predicted acyltransferase |
TIGRFAM ID | [TIGR02447] thioesterase domain, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGAT TGATTACCCC AACCACAGAG GCCGAACTAA AAGCCTACTA TCATTTTCGT TGGCAAGTAC TGCGTGAACC TTGGCGTCAG CCTGAAGGCT CTGAGCGTGA TGCGTATGAC GACATGAGTC AGCATCGGAT GATTGTTGAT GGCAGAGGGA AGCCCGTGGC AGTCGGACGT TTATACCTTA CTCCTGATAA TGATGGCCAA ATCCGCTATA TGGCGGTTTC TCCACATTAT CGCGGTAAAG GCATTGGTGC ATTGATAATG GTCGCCCTAG AGTCTTACGC GCGCCAAGAA GGGGCTAAAC GTCTTGTATG TAACGCCCGT GAAGAAGCCA TTCCGTTTTA TGTGCGTAAT GGCTTTGCAA ATCAAGGGGA ACTGAGTGAT GAACGTGGGC CTATTCGTCA TCAACAAATG TTAAAACCGC TTGATCCATT GTCAGACGTT ATTCGTAGGC CTGATTGGTG TGCTGAATTG CAAGATCGTT GGGATAAAGA AATTCCGATT AGCGATAAAA TGGGCATTAA AATTACACAA TATACTGGTT ATCGCTTTGA AGTTAGCGCA GTACTAAATG CAAACCTTAA TCCTCATAAT ACGATGTTTG CAGGCAGTAT TTTTACCATG GGCACGTTAA CCGCGTGGGG AATTGTGTGG TTGTTGCTTA AAGAACGAGG TTTGGATACC ACCAGTATTA TGCTCGTTGA TAGTCATATT CGTTATCGTC AACCAATCAC AGAAAACCCA AAGGGCATTA CGTCACTCAA TTGCTTGCAA GGGGATTTTG ATCGTTTGAA ATCAGGTAAA CGAGCGCGTG TAAAAGTAAC GGTTGCTTTG TGTAATGGTG ATAAGTCTGC AGCCGAGTTT TCAGGGACGT TTATGTTGAT GAGGGAGTAA
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Protein sequence | MFRLITPTTE AELKAYYHFR WQVLREPWRQ PEGSERDAYD DMSQHRMIVD GRGKPVAVGR LYLTPDNDGQ IRYMAVSPHY RGKGIGALIM VALESYARQE GAKRLVCNAR EEAIPFYVRN GFANQGELSD ERGPIRHQQM LKPLDPLSDV IRRPDWCAEL QDRWDKEIPI SDKMGIKITQ YTGYRFEVSA VLNANLNPHN TMFAGSIFTM GTLTAWGIVW LLLKERGLDT TSIMLVDSHI RYRQPITENP KGITSLNCLQ GDFDRLKSGK RARVKVTVAL CNGDKSAAEF SGTFMLMRE
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