Gene VSAL_I2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2936 
Symbol 
ID6987980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp3181638 
End bp3182537 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content45% 
IMG OID643381214 
Productputative acyltransferase 
Protein accessionYP_002264264 
Protein GI209696333 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID[TIGR02447] thioesterase domain, putative 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGAT TGATTACCCC AACCACAGAG GCCGAACTAA AAGCCTACTA TCATTTTCGT 
TGGCAAGTAC TGCGTGAACC TTGGCGTCAG CCTGAAGGCT CTGAGCGTGA TGCGTATGAC
GACATGAGTC AGCATCGGAT GATTGTTGAT GGCAGAGGGA AGCCCGTGGC AGTCGGACGT
TTATACCTTA CTCCTGATAA TGATGGCCAA ATCCGCTATA TGGCGGTTTC TCCACATTAT
CGCGGTAAAG GCATTGGTGC ATTGATAATG GTCGCCCTAG AGTCTTACGC GCGCCAAGAA
GGGGCTAAAC GTCTTGTATG TAACGCCCGT GAAGAAGCCA TTCCGTTTTA TGTGCGTAAT
GGCTTTGCAA ATCAAGGGGA ACTGAGTGAT GAACGTGGGC CTATTCGTCA TCAACAAATG
TTAAAACCGC TTGATCCATT GTCAGACGTT ATTCGTAGGC CTGATTGGTG TGCTGAATTG
CAAGATCGTT GGGATAAAGA AATTCCGATT AGCGATAAAA TGGGCATTAA AATTACACAA
TATACTGGTT ATCGCTTTGA AGTTAGCGCA GTACTAAATG CAAACCTTAA TCCTCATAAT
ACGATGTTTG CAGGCAGTAT TTTTACCATG GGCACGTTAA CCGCGTGGGG AATTGTGTGG
TTGTTGCTTA AAGAACGAGG TTTGGATACC ACCAGTATTA TGCTCGTTGA TAGTCATATT
CGTTATCGTC AACCAATCAC AGAAAACCCA AAGGGCATTA CGTCACTCAA TTGCTTGCAA
GGGGATTTTG ATCGTTTGAA ATCAGGTAAA CGAGCGCGTG TAAAAGTAAC GGTTGCTTTG
TGTAATGGTG ATAAGTCTGC AGCCGAGTTT TCAGGGACGT TTATGTTGAT GAGGGAGTAA
 
Protein sequence
MFRLITPTTE AELKAYYHFR WQVLREPWRQ PEGSERDAYD DMSQHRMIVD GRGKPVAVGR 
LYLTPDNDGQ IRYMAVSPHY RGKGIGALIM VALESYARQE GAKRLVCNAR EEAIPFYVRN
GFANQGELSD ERGPIRHQQM LKPLDPLSDV IRRPDWCAEL QDRWDKEIPI SDKMGIKITQ
YTGYRFEVSA VLNANLNPHN TMFAGSIFTM GTLTAWGIVW LLLKERGLDT TSIMLVDSHI
RYRQPITENP KGITSLNCLQ GDFDRLKSGK RARVKVTVAL CNGDKSAAEF SGTFMLMRE