Gene VSAL_I2921 details

Gene Information

• Locus tag: VSAL_I2921
• Symbol: epsG
• ID: 6988450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 3163185
• End bp: 3163634
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643381200
• Product: general secretion pathway protein G
• Protein accession: YP_002264250
• Protein GI: 209696319
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGTCA ATTCCGCTCA ACGTAAACAA GGTGGCTTTA CACTTTTAGA AGTGATGGTC 
GTTATCGTTA TTCTTGGTGT GCTAGCTAGC TTAGTTGTCC CTAATTTATT GGGTAACAAA 
GAAAAAGCCG ATCAACAAAA AGCGATCACA GATATCGTAG CGCTAGAAAA CTCATTGGAT 
ATGTATAAGT TAGATAACAG TGTATACCCA ACGACAGATC AAGGCTTAGA AGCATTGGTA 
TCGAAACCAT CAGCAAGTCC AGAGCCTCGT AATTATCGTG CTGACGGTTA TATTCGTCGT 
TTGCCAAATG ACCCATGGGG TTATGAATAC CAATACCTAA GTCCTGGTGA TAATGGCACG 
ATTGATATCT TCTCTTTAGG TGCTGATGGT CAAGAAGGCG GTGAAGGAGC TAATGCAGAT 
ATTGGTAACT GGAACATGCA AGACTTTTAA 

 

Protein sequence

MQVNSAQRKQ GGFTLLEVMV VIVILGVLAS LVVPNLLGNK EKADQQKAIT DIVALENSLD 
MYKLDNSVYP TTDQGLEALV SKPSASPEPR NYRADGYIRR LPNDPWGYEY QYLSPGDNGT 
IDIFSLGADG QEGGEGANAD IGNWNMQDF