Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2904 |
Symbol | |
ID | 6988574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 3149997 |
End bp | 3150605 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381184 |
Product | hypothetical protein |
Protein accession | YP_002264234 |
Protein GI | 209696303 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.447797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTAAAC GTAAACAACA TTCATCTCGC ACTTCTAACA CAAATAGAGC CTCTGGAAGT ATCCGAATCA TCAGCGGACG CTGGCGTGGA CGTAAACTTC CAGTGCATGA TGCAGAAGGA TTAAGACCCA CAACTGATCG CATAAAAGAA ACCGTATTTA ATTGGTTAGC CCTTGATATT CCTCGTTCTC GTTGTTTGGA TCTATTTTCT GGTAGCGGTG GTTTAGGATT TGAAGCGGCC TCTCGTGGAG CTGAACACGT TGTGATGCTT GAATTAAACA AACAAGCTCA TACCCAATTA AAACAAAATG CAGAAAGCCT AAAAGCCGAT AATATAGAAC TTCATCATAT CGATGCATTA GCGTATTTAA ACCAAACTCC CACGCCATTC CCATTTGATG TGGTCTTTAT TGATCCTCCT TTTAGAAAAG ACCTACTAGA AGAAACATTA ACTAAATTAG AACAAAATGG TTGGCTTACT AAAAACGCAA TGATTTACAT TGAAGCGGAA AAAGAACTAA GCTCATTGCC AACGCCTGCT CATTGGCGAT TGCATAGAGA TAAAACCGCA GGACAAGTTA CATTTAAACT ATATGAAAGA GAGGAATAG
|
Protein sequence | MLKRKQHSSR TSNTNRASGS IRIISGRWRG RKLPVHDAEG LRPTTDRIKE TVFNWLALDI PRSRCLDLFS GSGGLGFEAA SRGAEHVVML ELNKQAHTQL KQNAESLKAD NIELHHIDAL AYLNQTPTPF PFDVVFIDPP FRKDLLEETL TKLEQNGWLT KNAMIYIEAE KELSSLPTPA HWRLHRDKTA GQVTFKLYER EE
|
| |