| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2869 |
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| Symbol | rplA |
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| ID | 6989153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3110109 |
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| End bp | 3110813 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381142 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_002264199 |
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| Protein GI | 209696269 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000234009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAC TTACTAAGCG TATGCGTAAT ATCCGCGAAA AAGTGGAAGT TACTAAAGAC
TACGAAATCA ACGAAGCAAT TGCTCTTCTT AAAGAATTAG CAACAGCTAA CTTTAATGAA
AGCGTTGACG TTGCTGTTAA CCTTGGCATT GATGCACGTA AATCAGACCA AAACGTACGT
GGTGCAACTG TACTACCACA CGGTACTGGT CGTAATGTTC GTGTTGCTGT GTTCACTCAA
GGTGCAAACG CAGAAGCTGC TAAAGAAGCA GGCGCTGATC TAGTAGGCAT GGAAGATCTT
GCTGAGCTAG TTAAGAAAGG CGAAATGAAC TTTGACGTTG TTGTTGCTTC TCCAGATGCA
ATGCGCGTTG TTGGTCAACT AGGTACAATC CTAGGTCCTC GCGGTCTTAT GCCAAACCCT
AAAGTTGGTA CTGTAACTCC TAACGTTGCT CAAGCAGTTA AAAATGCTAA AGCTGGTCAG
GTTCGTTACC GTAACGACAA AAACGGCATC ATCCACACTA CTATCGGTAA AGTGGACTTT
GATGGCGCTC AACTTAAAGA GAACTTAGAA TCTCTTCTAG TTGCACTGAA AAAAGCAAAA
CCTACTTCAG CTAAAGGTGT TTTCCTGAAG AAGGTAAGCA TCTCAACTAC AATGGGTGCT
GGTGTTTCTC TAGATCAATC TACTTTAGAG ACAACAACAA AGTAA
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| Protein sequence | MTKLTKRMRN IREKVEVTKD YEINEAIALL KELATANFNE SVDVAVNLGI DARKSDQNVR
GATVLPHGTG RNVRVAVFTQ GANAEAAKEA GADLVGMEDL AELVKKGEMN FDVVVASPDA
MRVVGQLGTI LGPRGLMPNP KVGTVTPNVA QAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF
DGAQLKENLE SLLVALKKAK PTSAKGVFLK KVSISTTMGA GVSLDQSTLE TTTK
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