| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2828 |
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| Symbol | |
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| ID | 6987934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3062162 |
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| End bp | 3063865 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643381105 |
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| Product | putative sodium/solute symporter |
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| Protein accession | YP_002264162 |
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| Protein GI | 209696232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCC AAACTTGGAC GTTTATATTA GTAGGTATCA CTTTCACCCT TTATATCGGT
ATTGCGATAT GGGCAAGAGC AGGATCAACC AGTGAATTCT ATGTGGCTGG CGGAGGGGTT
CACCCTATTG CTAATGGCAT GGCAACCGCC GTTGACTGGA TGTCGGCTGC ATCATTTATC
TCAATGGCAG GTATCATTTC ATTTGTTGGT TATGATGGGA CTGTTTATTT AATGGGTTGG
ACTGGCGGTT ATGTTTTATT AGCTTTATGT CTTGCGCCTT ATTTACGTAA ATTTGGTAAG
TTTACGGTGC CAGATTTTAT TGGCGAACGT TATTACTCAC GAACCGCTCG TATGGTTGCG
GTGTTCTGTG CCATCTTTGT CTCTTTCACG TATGTGGCAG GACAAATGCG TGGTGTTGGT
GTGGTGTTCT CTCGGTTCCT AGAAGTTGAT ATCAACGTCG GCATCATCAT TGGTATGGGT
ATCGTATTTT TCTATGCGGT ATTAGGCGGT ATGAAAGGCA TCACTTATAC GCAGGTAGCT
CAATTCTGTG TCCTCATTTT CGCCTTCCTT GTTCCTGCTG TTTTCACCTC AATTATGATG
ACAGATAACG TTTTCCCTCA ACTTGGTATG GGCTCAACCG TTACCGGCTC TGAAGTTTAT
TTACTGGATA AACTGGATGG ATTAACCACT GAACTTGGTT TTACACCATA CACTGATGGC
TCTAAGAGCA TGGTTGATGT GTTCTTTATC TGTGCTGCAC TAATGGTTGG TACAGCAGGG
CTTCCTCACG TAATTATTCG TTTCTTCACG GTTCCTCGTG TTAAAGATGC ACGTATCTCT
GCAGGTTGGG CTTTACTGTT TATTTCATTC TTATACACCA CTGCACCTGC GGTTGCCGCG
TTTGCTCGTG TAAATATGAT TGAAACCATT AATGGAACCG ACAACCAAGG GGTTGCCGCT
GCGGATGCAC CGAGTTGGTA TAAAAACTGG GAAGACACAG GTCTAGTTGC TTGGGAAGAT
AAAAATGGCG ATGGCAAGAT GTTCTATTCT GGTGATGAGC GTAATGAAAT GGACATCAAC
CGAGATATTA TTGTTCTAGC ATCTCCTGAA CTGGCAAACT TACCAAACTG GGTTGTTGCA
TTGCTAGCAG CCGGTGGTTT AGCGGCGGCA TTATCTACGG CGGCAGGTCT GCTACTGGTT
ATCTCAACCT CTATCTCTCA TGATTTATTG AAAAAAGGCT TTAAGCCAGA CATGACCGAT
AAGCAAGAGC TACTCGCAGC CCGCCTTGCT GCCATCGTTG CCATCATTGG TGCTGGTTAC
TTAGGGATAA ACCCGCCGGG CTTTGTCGCA CAGGTGGTCG CCTTCTCCTT CGGTTTAGCA
GCAGCTTCTT TCTTCCCTGC CATTATCTTA GGTATTTTCT ATAAGAAGAT GAATAAGGAA
GGCGCCATTG CAGGCATGGT TTCTGGTGTG GTGTTCACTA CAGCTTATAT CGTTTACTTT
AAATTCATTA ATCCAGCAGC AAGCACACCA GACAACTGGT GGTTTGGTAT CAGCCCTGAA
GGGATCGGTA CGCTAGGTAT GTGTCTAAAC TTTATTGTTT CGATTGCTGT GAATAAAGTC
ACCGCTGAAG TACCACAAGA TGTTCAAGAT CTGGTTGAGT CGATTCGTTA TCCTAAAGGT
GCCGGTGAAG CTCAGGATCA TTAA
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| Protein sequence | MDIQTWTFIL VGITFTLYIG IAIWARAGST SEFYVAGGGV HPIANGMATA VDWMSAASFI
SMAGIISFVG YDGTVYLMGW TGGYVLLALC LAPYLRKFGK FTVPDFIGER YYSRTARMVA
VFCAIFVSFT YVAGQMRGVG VVFSRFLEVD INVGIIIGMG IVFFYAVLGG MKGITYTQVA
QFCVLIFAFL VPAVFTSIMM TDNVFPQLGM GSTVTGSEVY LLDKLDGLTT ELGFTPYTDG
SKSMVDVFFI CAALMVGTAG LPHVIIRFFT VPRVKDARIS AGWALLFISF LYTTAPAVAA
FARVNMIETI NGTDNQGVAA ADAPSWYKNW EDTGLVAWED KNGDGKMFYS GDERNEMDIN
RDIIVLASPE LANLPNWVVA LLAAGGLAAA LSTAAGLLLV ISTSISHDLL KKGFKPDMTD
KQELLAARLA AIVAIIGAGY LGINPPGFVA QVVAFSFGLA AASFFPAIIL GIFYKKMNKE
GAIAGMVSGV VFTTAYIVYF KFINPAASTP DNWWFGISPE GIGTLGMCLN FIVSIAVNKV
TAEVPQDVQD LVESIRYPKG AGEAQDH
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