Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2816 |
Symbol | |
ID | 6988856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3050102 |
End bp | 3051352 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381093 |
Product | MFS transporter |
Protein accession | YP_002264150 |
Protein GI | 209696220 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTTTTT TAAGGTCTTT TCATTTTATT AGGTTTTCTA TTATGTTTTC TCAATTTAGC CATAACGTTC GACAGTATAT GTTGGTGACG TTTAATTATT GGAATTTCAC TATTACTGAT GGCGCATTGC GTATGTTGGT GGTGCTGTAT TTTCATGATT TAGGTTATGG CACCTTAGCC ATTGCTTCTC TCTTTTTATT TTATGAATTT TTTGGTGTCG TAACGAATTT ACTCGGAGGG TGGTTAGGGG CTCGGTTAGG GCTAAATAAA ACCATGAATG TGGGTTTGAT AATGCAAGTT TTTGCATTAT TGATGCTGGC ATTACCGAGT GTTTGGTTAA CTATCCCATG GGTGATGGCA GCACAAGCAT TATCAGGTAT TGCTAAAGAT CTGAATAAGA TGAGTGCAAA AAGTGCGATT AAAACATTGG TGCCTAGCGA TCAAGAAGGG GCGCTCTATA AGTGGATAGC GATTCTTACG GGTTCTAAAA ATGCGCTTAA AGGGGCCGGG TTCTTTTTAG GTGGATTACT ATTAACGACG GTTGGATTTC AGCTTGCCGT TATTGGGATG GCAGCGGTTC TTTTTGCTGT TTTTCTTGGT AGCGTAATGT TGCTTGATGG TGACATGGGA AAAGCAAAGT CCAAACCTAA ATTTACGCAG TTATTTTCAA AATCAGAACA GATTAATCGG TTATCAGCGG CACGTTTATT TTTGTTTGGT GCAAGAGATG TTTGGTTTGT CGTTGCTTTA CCGATTTATT TAGGCAGTGT GTTTGGTTGG GATCACTCTT TAGTGGGTGG TTTTTTAGCA TTGTGGGTTA TTGCTTATGG GTTTGTTCAA GGATTTGCTC CTAAGATAAC AGGTAAAAAA GAAGGCCGAA CCCCTGATGG CAGAGCGGCA TTACATTGGG TTGCGCTGTT AACGATAGTC ACGGGGATTA TTGCGTATCT AGTGCAAGTT GAGTGGCAAG CTGAATATAC GATCGTGATT GGTTTATTGA TGTTTGGGGC TGTATTTGCG GTTAATTCGT CATTACATTC GTACTTGATT GTGAGTTACG CCAAAGGCGA TGGTGTTTCT GTGGATGTCG GTTTTTATTA TATGGCGAAT GCGATGGGAC GTTTGATCGG AACGATTTTA TCTGGACTAG TCTTTCAAGT GGCAGGTTTT GCAGCGTGTT TGTGGGTATC TTTCGGTTTC TTGCTTCTAT CTACGCTGAT ATCAATTAAA TTACCTAAAA ATACAGAATG A
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Protein sequence | MFFLRSFHFI RFSIMFSQFS HNVRQYMLVT FNYWNFTITD GALRMLVVLY FHDLGYGTLA IASLFLFYEF FGVVTNLLGG WLGARLGLNK TMNVGLIMQV FALLMLALPS VWLTIPWVMA AQALSGIAKD LNKMSAKSAI KTLVPSDQEG ALYKWIAILT GSKNALKGAG FFLGGLLLTT VGFQLAVIGM AAVLFAVFLG SVMLLDGDMG KAKSKPKFTQ LFSKSEQINR LSAARLFLFG ARDVWFVVAL PIYLGSVFGW DHSLVGGFLA LWVIAYGFVQ GFAPKITGKK EGRTPDGRAA LHWVALLTIV TGIIAYLVQV EWQAEYTIVI GLLMFGAVFA VNSSLHSYLI VSYAKGDGVS VDVGFYYMAN AMGRLIGTIL SGLVFQVAGF AACLWVSFGF LLLSTLISIK LPKNTE
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